Package: Spectra
Title: Spectra Infrastructure for Mass Spectrometry Data
Version: 1.4.3
Description: The Spectra package defines an efficient infrastructure
   for storing and handling mass spectrometry spectra and functionality to
   subset, process, visualize and compare spectra data. It provides different
   implementations (backends) to store mass spectrometry data. These comprise
   backends tuned for fast data access and processing and backends for very
   large data sets ensuring a small memory footprint.
Authors@R: c(person(given = "RforMassSpectrometry Package Maintainer",
                    email = "maintainer@rformassspectrometry.org",
                    role = "cre"),
             person(given = "Laurent", family = "Gatto",
                    email = "laurent.gatto@uclouvain.be",
                    role = "aut",
                    comment = c(ORCID = "0000-0002-1520-2268")),
             person(given = "Johannes", family = "Rainer",
                    email = "Johannes.Rainer@eurac.edu",
                    role = "aut",
                    comment = c(ORCID = "0000-0002-6977-7147")),
             person(given = "Sebastian", family = "Gibb",
                    email = "mail@sebastiangibb.de",
                    role = "aut",
                    comment = c(ORCID = "0000-0001-7406-4443")))
Depends: R (>= 4.0.0), S4Vectors, BiocParallel, ProtGenerics (>=
        1.25.1)
Imports: methods, IRanges, MsCoreUtils (>= 1.3.3), graphics, grDevices,
        stats, tools, utils, fs, BiocGenerics
Suggests: testthat, knitr (>= 1.1.0), msdata (>= 0.19.3), roxygen2,
        BiocStyle (>= 2.5.19), mzR (>= 2.19.6), rhdf5 (>= 2.32.0),
        rmarkdown, vdiffr (>= 1.0.0), magrittr
License: Artistic-2.0
VignetteBuilder: knitr
BugReports: https://github.com/RforMassSpectrometry/Spectra/issues
URL: https://github.com/RforMassSpectrometry/Spectra
biocViews: Infrastructure, Proteomics, MassSpectrometry, Metabolomics
RoxygenNote: 7.1.2
Roxygen: list(markdown=TRUE)
Collate: 'hidden_aliases.R' 'AllGenerics.R' 'MsBackend-functions.R'
        'MsBackend.R' 'MsBackendDataFrame-functions.R'
        'MsBackendDataFrame.R' 'MsBackendHdf5Peaks-functions.R'
        'MsBackendHdf5Peaks.R' 'MsBackendMzR-functions.R'
        'MsBackendMzR.R' 'Spectra-functions.R' 'Spectra.R'
        'functions-util.R' 'mz-delta-functions.R'
        'peak-list-functions.R' 'peaks-functions.R'
        'plotting-functions.R' 'zzz.R'
git_url: https://git.bioconductor.org/packages/Spectra
git_branch: RELEASE_3_14
git_last_commit: 4e99629
git_last_commit_date: 2022-02-25
Date/Publication: 2022-03-01
NeedsCompilation: no
Packaged: 2022-03-01 19:29:47 UTC; biocbuild
Author: RforMassSpectrometry Package Maintainer [cre],
  Laurent Gatto [aut] (<https://orcid.org/0000-0002-1520-2268>),
  Johannes Rainer [aut] (<https://orcid.org/0000-0002-6977-7147>),
  Sebastian Gibb [aut] (<https://orcid.org/0000-0001-7406-4443>)
Maintainer: RforMassSpectrometry Package Maintainer <maintainer@rformassspectrometry.org>
Built: R 4.1.2; ; 2022-03-02 12:05:04 UTC; windows
