makeFlatFileDir {TFBSTools} | R Documentation

## Generate "FlatFileDir" directory

### Description

On JASPAR web service, "FlatFileDir" includes all the *.pfm and a matrix_list.txt file

### Usage

      makeFlatFileDir(JASPAR)

### Arguments

`JASPAR` | A JASPAR object. Now it can be JASPAR2014 or JASPAR2016.

### Details

The matrix_list.txt file contains each pfm per line. Each line has the ID, total information content, name, class and tags of one pfm.

### Value

The generated files are under "FlatFileDir" directory.

### Author(s)

Ge Tan

### Examples

        library(JASPAR2014)
        makeFlatFileDir(JASPAR2014)
        unlink("FlatFileDir", recursive = TRUE)

[Package TFBSTools version 1.32.0 Index]