tffamCirc.prep {TFutils} | R Documentation

## set up list of pfms in motifStack protocol

### Description

set up list of pfms in motifStack protocol

### Usage

    tffamCirc.prep(tffam = "Paired-related HD factors{3.1.3}", trimfac = 0.4)

### Arguments

`tffam` | character(1) name of TF family as found in TFutils::hocomoco.mono field `TF family`
`trimfac` | fraction passed as parameter `t` to motifStack::trimMotif

### Value

a list of pfm instances as defined in motifStack

### Note

Uses MotifDb, motifStack to create a list of pfms

### Examples

    n1 = tffamCirc.prep()
    str(n1)

[Package TFutils version 1.14.0 Index]