calculateDomainogram {UMI4Cats} | R Documentation

## Create Domainogram

### Description

Using as input the raw UMIs, this function creates a domainogram for the supplied scales.

### Usage

    calculateDomainogram(umi4c, scales = 5:150, normalized = TRUE)

### Arguments

`umi4c` | UMI4C object as generated by `makeUMI4C`.
`scales` | Integer vector indicating the number of scales to use for the domainogram creation. Default: 5:150.
`normalized` | Logical whether the the resulting domainograms should be normalized or not. Default: TRUE.

### Value

A matrix where the first column represents the fragment end coordinates (start) and the rest represent the number of UMIs found when using a specific scale.

[Package UMI4Cats version 1.4.0 Index]