transCoord {VarCon} | R Documentation

## Small table as exemplary transcript table with exon coordinates

### Description

Small table as exemplary transcript table with exon coordinates.

### Usage

    transCoord

### Format

data frame

Gene.stable.ID

  Ensembl gene ID

Transcript.stable.ID

  Ensembl Transcript ID

Strand

  Strand of the feature

Exon.region.start..bp.

  Smalles coordinate of the exon end coordinates of a specific exon

Exon.region.end..bp.

  Largest coordinate of the exon end coordinates of a specific exon

cDNA.coding.start

  Start of the coding sequence

cDNA.coding.end

  End of the coding sequence

CDS.start

  Covered coding nucleotides start

CDS.end

  Covered coding nucleotides end

Exon.rank.in.transcript

  Rank of the exon within the respective transcript

Exon.stable.ID

  Ensembl exon ID

Chromosome.scaffold.name

  Name of the chromosome

### Examples

     transCoord

[Package VarCon version 1.2.0 Index]