predictMfeStructure {XNAString} | R Documentation

## Prediction of MFE structure with ViennaRNA package

### Description

This function is a wrapper for RNAfold from ViennaRNA package.

### Usage

    predictMfeStructureFun(obj)

    predictMfeStructure(obj, ...)

    ## S4 method for signature 'XNAString'
    predictMfeStructure(obj)

### Arguments

`obj` | XNAString object
`...` | optional arguments to generic function to support additional methods

### Value

character, secondary structure in dot-bracket notation

### Examples

    obj1 <- XNAString(
      base = "ATCG",
      sugar = "FODD",
      conjugate3 = "TAG"
    )
    predictMfeStructure(obj1)

[Package XNAString version 1.2.2 Index]