.UTR5Analysis {abseqR} | R Documentation

## 5' UTR analysis

### Description

Generates all the required plots for 5' UTR analysis. This includes upstream length distributions and upstream sequence validity.

### Usage

    .UTR5Analysis(utr5Directories, utr5Out, sampleNames, combinedNames,
      mashedNames, upstreamRanges, .save = TRUE)

### Arguments

`utr5Directories` | list type. 5UTR directories where files are located
`utr5Out` | string type. Where to dump output
`sampleNames` | vector type. 1-1 with utr5Directories
`combinedNames` | string type. Title friendly string
`mashedNames` | string type. File name friendly string
`upstreamRanges` | list type. Upstream ranges for each sample. If length(utr5Directories) > 1, the plots will only be generated for upstream ranges that are present in ALL samples. (i.e the intersection)
`.save` | logical type, save Rdata?

### Value

none

[Package abseqR version 1.12.0 Index]