plotAlevinKneeNbrGenes {alevinQC} | R Documentation

## Knee plot of the number of detected genes per cell

### Description

Plot the number of detected genes per cell in decreasing order. Only cells contained in the original whitelist are considered.

### Usage

    plotAlevinKneeNbrGenes(cbTable)

### Arguments

`cbTable` | `data.frame` (such as the `cbTable` returned by `readAlevinQC`) with the number of detected genes per cell.

### Value

A ggplot object

### Author(s)

Charlotte Soneson

### Examples

    alevin <- readAlevinQC(system.file("extdata/alevin_example_v0.14",
                                       package = "alevinQC"))
    plotAlevinKneeNbrGenes(alevin$cbTable)

[Package alevinQC version 1.10.0 Index]