simData {baySeq} | R Documentation

## Simulated data for testing the baySeq package methods

### Description

This data set is a matrix (‘simData’) of simulated counts from a simple pairwise expression analysis. It is simulated according to a negative binomial distribution with varying parameters for each row. The first hundred rows of the data are truly differentially expressed, the remainder have no differential expression.

### Usage

    simData

### Format

A matrix of which each of the ten columns represents a sample, and each row some discrete data (acquired by sequencing).

### Source

Simulation.

### References

Hardcastle T.J., and Kelly, K. baySeq: Empirical Bayesian Methods For Identifying Differential Expression In Sequence Count Data. BMC Bioinformatics (2010)

[Package baySeq version 2.28.0 Index]