pdfChromosomesSmoothCopyNumber {beadarraySNP} | R Documentation

## reportWrappers

### Description

Functions that help create pdf reports

### Usage

    pdfChromosomesSmoothCopyNumber(object, filename, ...)
    pdfSamplesSmoothCopyNumber(object, filename, ...)
    pdfChromosomeGainLossLOH(object, filename, ...)

### Arguments

`object` | SnpSetIllumina object
`filename` | filename of output pdf file
`...` | arguments for report functions

### Details

These functions set up and perfom reporting to pdf files.

### Value

This function is used for its side effects

### Author(s)

Jan Oosting

### See Also

`reportChromosomesSmoothCopyNumber`, `reportSamplesSmoothCopyNumber`, `reportChromosomeGainLossLOH`

### Examples

      ## Not run: data(chr17.260)
      ## Not run: data.nrm<-standardNormalization(chr17.260)
      ## Not run: pdfChromosomesSmoothCopyNumber(data.nrm, "Chr17.pdf", grouping=pData(data.nrm)$Group,smooth.lambda=4)

[Package beadarraySNP version 1.60.0 Index]