downloadENCODEknockdownMetadata {cTRAP} | R Documentation

## Download metadata for ENCODE knockdown experiments

### Description

Download metadata for ENCODE knockdown experiments

### Usage

    downloadENCODEknockdownMetadata(
      cellLine = NULL,
      gene = NULL,
      file = "ENCODEmetadata.rds"
    )

### Arguments

`cellLine` | Character: cell line
`gene` | Character: target gene
`file` | Character: RDS filepath with metadata (if file doesn't exist, it will be created)

### Value

Data frame containing ENCODE knockdown experiment metadata

### See Also

Other functions related with using ENCODE expression data: `loadENCODEsamples()`, `performDifferentialExpression()`, `prepareENCODEgeneExpression()`

### Examples

    downloadENCODEknockdownMetadata("HepG2", "EIF4G1")

[Package cTRAP version 1.12.0 Index]