as.table.referenceComparison {cTRAP} | R Documentation

## Cross Tabulation and Table Creation

### Description

Cross Tabulation and Table Creation

### Usage

    ## S3 method for class 'referenceComparison'
    as.table(x, ..., clean = TRUE)

### Arguments

`x` | `referenceComparison` object
`...` | Extra parameters not currently used
`clean` | Boolean: only show certain columns (to avoid redundancy)?

### Value

Complete table with metadata based on a `targetingDrugs` object

### See Also

Other functions related with the ranking of CMap perturbations: `filterCMapMetadata()`, `getCMapConditions()`, `getCMapPerturbationTypes()`, `loadCMapData()`, `loadCMapZscores()`, `parseCMapID()`, `plot.perturbationChanges()`, `plot.referenceComparison()`, `plotTargetingDrugsVSsimilarPerturbations()`, `prepareCMapPerturbations()`, `print.similarPerturbations()`, `rankSimilarPerturbations()`

Other functions related with the prediction of targeting drugs: `listExpressionDrugSensitivityAssociation()`, `loadExpressionDrugSensitivityAssociation()`, `plot.referenceComparison()`, `plotTargetingDrugsVSsimilarPerturbations()`, `predictTargetingDrugs()`

[Package cTRAP version 1.12.0 Index]