getBioNetBasePositions {caOmicsV} | R Documentation

## Methods to Retrieve bioNet Layout Parameters

### Description

Retrieve bioNet Layout Parameters. The bioNet layout must be initialized first.

### Usage

      getBioNetBasePositions()
      getBioNetGraph()
      getBioNetNodePaddingScale()
      getBioNetNodeParameters()
      getBioNetNodePlotAreaBoundary()
      getBioNetNodeRadius()
      getBioNetPlotAreaWidth()
      getBioNetPlotSampleWidth()
      getBioNetPlotTotalSample()

### Value

getBioNetBasePositions() returns x and y coordinate and rotation degree of nodes in bioNet plot. getBioNetGraph()returns bioNet graph object. getBioNetNodePaddingScale() returns the scale of Padding beteen nodes in bioNet plot. getBioNetNodeParameters() returns a numeric vector for BioNet_Total_Sample, BioNet_Sample_Width, BioNet_Node_Radius, BioNet_Node_Padding, BioNet_PlotArea_Width, BioNet_PlotArea_Inner, and BioNet_PlotArea_Outer. getBioNetNodePlotAreaBoundary() returns a numeric vector for BioNet_PlotArea_Inner and BioNet_PlotArea_Outer. getBioNetNodeRadius() returns the radius of the nodes in bioNet plot. getBioNetPlotAreaWidth() returns the total width of bioNet plot area. getBioNetPlotSampleWidth() returns an integer for width of a sample area in bioNet plot. getBioNetPlotTotalSample() returns an integer for number of total samples in bioNet plot.

### Author(s)

Henry Zhang

[Package caOmicsV version 1.24.0 Index]