H3K4me3 {chromswitch} | R Documentation

## H3K4me3 peak calls in a short region for six adult tissues

### Description

A toy dataset containing MACS2 narrow peak calls for 3 brain tissues and 3 other adult tissues from the Roadmap Epigenomics Project, restricted to a short region on chromosome 19. The generation of this dataset is executed by the script in the "data-raw" directory of this package, which can be viewed at https://github.com/selinj/chromswitch/tree/master/data-raw.

### Usage

    H3K4me3

### Format

A list with six entries, named according to IDs of the samples. Each element contains a GRanges object with peak calls and associated statistics which are computed by MACS2. This is the format expected by the `peaks` argument in functions in chromswitch.

### Source

egg2.wustl.edu/roadmap/web_portal/

[Package chromswitch version 1.16.0 Index]