ahChainFiles {circRNAprofiler} | R Documentation

## ahChainFile

### Description

A data frame containing the AnnotationHub id related to the *.chain.gz file, specific for each species and genome. The file name reflects the assembly conversion data contained within in the format <db1>To<Db2>.over.chain.gz. For example, a file named mm10ToHg19.over.chain.gz file contains the liftOver data needed to convert mm10 (Mouse GRCm38) coordinates to hg19 (Human GRCh37).

### Usage

    data(ahChainFiles)

### Format

A data frame with 1113 rows and 2 columns

id

  is the AnnotationHub id

chainFile

  is the *.chain.gz file

### Examples

    data(ahChainFiles)

[Package circRNAprofiler version 1.8.0 Index]