importOther {circRNAprofiler} | R Documentation

## Import circRNAs detected by an annotation-based circRNA detection tool

### Description

The function importOther() is designed to read output file from a annotation-based circRNA detection tool. The user after the detection of the crcRNAs must format the output file, so that it has the following columns with header: gene, strand, chrom, startUpBSE, endDownBSE and coverage. If more columns are present they will be discared.

### Usage

    importOther(pathToFile)

### Arguments

`pathToFile` | A character string specifying the path to the file containing the detected circRNAs.

### Value

A data frame.

### Examples

    # Path to an example file containing circRNAs
    pathToFile <- system.file("extdata", "other/circRNAs_001.txt",
        package="circRNAprofiler")

    # Inner function.
    # Import circRNAs
    importOther(pathToFile)

[Package circRNAprofiler version 1.8.0 Index]