clustifyr-package {clustifyr} | R Documentation

## clustifyr: Classifier for Single-cell RNA-seq Using Cell Clusters

### Description

Package designed to aid in classifying cells from single-cell RNA sequencing data using external reference data (e.g., bulk RNA-seq, scRNA-seq, microarray, gene lists). A variety of correlation based methods and gene list enrichment methods are provided to assist cell type assignment.

### Author(s)

Maintainer: Rui Fu raysinensis@gmail.com

Authors:

- Kent Riemondy kent.riemondy@ucdenver.edu

Other contributors:

- Austin Gillen austin.gillen@ucdenver.edu [contributor]

- Chengzhe Tian Chengzhe.Tian@colorado.edu [contributor]

- Jay Hesselberth jay.hesselberth@gmail.com [contributor]

- Yue Hao haoyuethink@gmail.com [contributor]

- Michelle Daya michelle.daya@ucdenver.edu [contributor]

- Sidhant Puntambekar sidhantnp@yahoo.com [contributor]

- RNA Bioscience Initiative [funder]

### See Also

Useful links:

- http://github.com/rnabioco/clustifyr#readme

- https://rnabioco.github.io/clustifyr/

- Report bugs at https://github.com/rnabioco/clustifyr/issues

[Package clustifyr version 1.6.0 Index]