extractCoords {combi} | R Documentation

## Extract coordinates from fitted object

### Description

Extract coordinates from fitted object

### Usage

    extractCoords(modelObj, Dim)

### Arguments

`modelObj` | The fitted model
`Dim` | the required dimensions

### Value

A list with components (matrices with two columns)

`latentData` | The latent variables
`featureData` | The feature parameters
`varData` | The variables

### Examples

    data(Zhang)

    #Unconstrained
    microMetaboInt = combi(
    list("microbiome" = zhangMicrobio, "metabolomics" = zhangMetabo),
    distributions = c("quasi", "gaussian"), compositional = c(TRUE, FALSE),
    logTransformGaussian = FALSE, verbose = TRUE)

        #Load the fits
    load(system.file("extdata", "zhangFits.RData", package = "combi"))
    extractCoords(microMetaboInt, Dim = c(1,2))

[Package combi version 1.6.0 Index]