get_vsd {crossmeta} | R Documentation

## Get variance stabilized data for exploratory data analysis

### Description

Get variance stabilized data for exploratory data analysis

### Usage

    get_vsd(eset, rlog_cutoff = 50)

### Arguments

`eset` | ExpressionSet loaded with load_raw. Requires group column in `pData(eset)` specifying sample groupings.
`rlog_cutoff` | Sample number above which will use `vst` instead of `rlog`. Default is 50.

### Value

`DESeqTransform` with variance stabilized expression data.

[Package crossmeta version 1.20.0 Index]