get_progeny {decoupleR} | R Documentation

## Pathway RespOnsive GENes for activity inference (PROGENy).

### Description

Wrapper to access PROGENy model gene weights. Each pathway is defined with a collection of target genes, each interaction has an associated p-value and weight. The top significant interactions per pathway are returned.

### Usage

    get_progeny(organism = "human", top = 500)

### Arguments

`organism` | Which organism to use. Only human and mouse are available.
`top` | Number of genes per pathway to return.

### Examples

    progeny <- get_progeny(organism='human', top=500)

[Package decoupleR version 2.0.1 Index]