IRanges additional methods {easyRNASeq} | R Documentation

## Extension of the IRanges package

### Description

Return the ranges of the genomic annotation.

### Usage

    ## S4 method for signature 'RNAseq'
    ranges(x)

### Arguments

`x` | An object of the `RNAseq` class

### Details

It retrieves the object stored in the genomicAnnotation slot of the RNAseq object and apply the `ranges` function on it.

### Value

An `IRangesList` object, where the split is performed by seqnames (e.g. chromosomes).

### Author(s)

Nicolas Delhomme

### Examples

    	## Not run:
    	library("RnaSeqTutorial")

    	obj <- getAnnotation(
                AnnotParam(
                  organism="Dmelanogaster",
                  datasource=system.file(
        	          "extdata",
    				        "Dmel-mRNA-exon-r5.52.gff3",
    				        package="RnaSeqTutorial"),
      		        type="gff3"
      ))

    	ranges(obj)

    ## End(Not run)

[Package easyRNASeq version 2.30.0 Index]