plot_test {epidecodeR} | R Documentation

## Generates boxplot of distribution of log2FC of dysregulated genes and adjusted P value of signficance test of difference in mean log2FC between groups computed using one-way ANOVA test

### Description

Generates boxplot of distribution of log2FC of dysregulated genes and adjusted P value of signficance test of difference in mean log2FC between groups computed using one-way ANOVA test

### Usage

    plot_test(obj, title, ylab)

### Arguments

`obj` | epidecodeR object - epidecodeR object generated using epidecodeR function
`title` | Title of the plot
`ylab` | Y-axis label

### Value

Boxplot of distribution of log2FC of dysregulated genes between groups

### Examples

    events<-system.file("extdata","NOMO-1_ref_peaks.bed",package="epidecodeR")
    deg<-system.file("extdata", "FTOi.txt", package="epidecodeR")
    epiobj<-epidecodeR(events=events,deg=deg,pval=0.05,param=3,ints=c(2,4))
    plot_test(epiobj,title="log2FC distribution based on m6A degree",ylab="log2FC")

[Package epidecodeR version 1.2.0 Index]