get_phen_list {flowGraph} | R Documentation

## Creates edge lists.

### Description

Creates edge lists indicating relationships between cell populations given meta data on these cell populations produced by the `get_phen_meta` function.

### Usage

    get_phen_list(meta_cell = NULL, phen = NULL, no_cores = 1)

### Arguments

`meta_cell` | A data frame containing meta data on cell populations as produced by the `get_phen_meta` function.
`phen` | A string vector of phenotype or cell population name labels. Cannot be set to `NULL` if `meta_cell` is set to `NULL`.
`no_cores` | An integer indicating how many cores to parallelize on.

### Value

A list containing 'pchild', an edge list indicating where edges point to, 'pparen', an edge list indicating where edges point from, and 'edf', a data frame where each row contains the nodes an edge points 'from' and 'to'.

### See Also

`get_phen_meta` `cell_type_layers`

### Examples

     phen <- c('A+B-C+', 'A+B-', 'A+')
     get_phen_list(phen=phen)

[Package flowGraph version 1.2.0 Index]