gemini_prepare_input {gemini} | R Documentation

## Prepare input before Model creation

### Description

This is an internal function to GEMINI, allowing for data cleanup and preprocessing before a Model object is created. This removes any gene pairs targeting the same gene twice, and removes any empty samples/replicates.

### Usage

    gemini_prepare_input(Input, gene.columns, sample.col.name = "samplename")

### Arguments

`Input` | An object of class gemini.input
`gene.columns` | a character vector of length(2)
`sample.col.name` | a character indicating the name of the sample column (default = "samplename")

### Value

a (prepared) gemini.input object

### Examples

    data("Input", package = "gemini")
    Input %<>% gemini_prepare_input(gene.columns = c("U6.gene", "H1.gene"))

[Package gemini version 1.8.0 Index]