exampleSEControl {hummingbird} | R Documentation

## Sample input data

### Description

A SummarizedExperiment object containing the input data for the control group. It is part of the sample dataset exampleHummingbird.

### Usage

    exampleSEControl

### Details

It contains the two assays: normM, normUM and the CpG position information: pos.

### Source

Chen et al. (2017) Global misregulation of genes largely uncoupled to DNA methylome epimutations characterizes a congenital overgrowth syndrome. Scientific Reports 7, 12667

The raw FASTQ files of the WGBS experiment from this study are publicly available at Gene Expression Omnibus (GEO) database with accession no. GSE93775.

### Examples

    library(SummarizedExperiment)
    data(exampleHummingbird)
    exampleSEControl

[Package hummingbird version 1.4.0 Index]