getUnames {imageHTS} | R Documentation

## Get well unique names

### Description

Build valid well unique names, according to the screen layout and to input filter arguments. Each well in the screen has an unique name, based on its plate, replicate, row and column indices.

### Usage

    getUnames(x, plate, replicate, row, col, content)

### Arguments

`x` | An imageHTS object.
`plate` | An optional numeric vector indicating the plate indices to keep.
`replicate` | An optional numeric vector indicating the replicate indices to keep.
`row` | An optional numeric vector indicating the row indices to keep.
`col` | An optional numeric vector indicating the column indices to keep.
`content` | An optional character string indicating the well content type to keep.

### Details

Well `content` types are defined in the `plateconf.txt` configuration file. See `getWellFeatures` for details.

Well unique names can be also built and manipulated using `prw2uname` and `uname2prw`.

### Value

A character vector containing a set of well unique names that are compatible with the input filter arguments.

### Author(s)

Gregoire Pau, gregoire.pau@embl.de, 2010

### See Also

`prw2uname`, `uname2prw`, `getWellFeatures`

### Examples

    ## initialize imageHTS object using the local submorph screen
    local = tempdir()
    server = system.file('submorph', package='imageHTS')
    x = parseImageConf('conf/imageconf.txt', localPath=local, serverURL=server)
    x = configure(x, 'conf/description.txt', 'conf/plateconf.txt',
    'conf/screenlog.txt')

    getUnames(x, col=2)
    getUnames(x, replicate=1, col=3)
    getUnames(x, content='sample') ## get 'sample' wells
    setdiff(getUnames(x), getUnames(x, content='empty')) ## get non-empty wells

[Package imageHTS version 1.44.1 Index]