installCellPicker {imageHTS} | R Documentation

## Set up imageHTS web modules

### Description

`installCellPicker` and `installWebQuery` install the cellPicker and webQuery modules in the local project directory.

`cellPicker` is a web application that allows the interactive selection/annotation of cells within images using a point-and-click web interface.

`webQuery` is a web application that allows to query information from the screen by well and well annotation. The webQuery module requires a web server and PHP to be installed.

### Usage

    installCellPicker(x)
    installWebQuery(x)

### Arguments

`x` | An imageHTS object.

### Details

After installation, the cellPicker module can be used with the function `popCellPicker`.

`x` must be annotated using `annotate` before using `installWebQuery`. After installation, the webQuery module can be used with the function `popWebQuery`.

### Value

None.

### Author(s)

Gregoire Pau, gregoire.pau@embl.de, 2010

### See Also

`popCellPicker`, `popWebQuery`

### Examples

    ## initialize imageHTS object using the local submorph screen
    local = tempdir()
    server = system.file('submorph', package='imageHTS')
    x = parseImageConf('conf/imageconf.txt', localPath=local, serverURL=server)
    x = annotate(x, 'conf/annotation.txt')

    installCellPicker(x)
    installWebQuery(x)

[Package imageHTS version 1.44.1 Index]