plotEnrichmentResults {maftools} | R Documentation

## Plots results from clinicalEnrichment analysis

### Description

Plots results from clinicalEnrichment analysis

### Usage

    plotEnrichmentResults(
      enrich_res,
      pVal = 0.05,
      ORthr = 1,
      featureLvls = NULL,
      cols = NULL,
      annoFontSize = 0.8,
      geneFontSize = 0.8,
      legendFontSize = 0.8,
      showTitle = TRUE
    )

### Arguments

`enrich_res` | results from `clinicalEnrichment` or `signatureEnrichment`
`pVal` | Default 0.05
`ORthr` | Default 1. Odds ratio threshold. >1 indicates positive enrichment in the group of interest.
`featureLvls` | Plot results from the selected levels. Default NULL, plots all.
`cols` | named vector of colors for factor in a clinical feature. Default NULL
`annoFontSize` | cex for annotation font size. Default 0.8
`geneFontSize` | cex for gene font size. Default 0.8
`legendFontSize` | cex for legend font size. Default 0.8
`showTitle` | Default TRUE

### Value

returns nothing.

### See Also

`clinicalEnrichment` `signatureEnrichment`

[Package maftools version 2.10.05 Index]