snp2ensembl {martini} | R Documentation

## Map SNPs to Ensembl genes.

### Description

Maps SNPs from a GWAS experiment to genes.

### Usage

    snp2ensembl(gwas, organism = 9606, flank = 0)

### Arguments

`gwas` | A SnpMatrix object with the GWAS information.
`organism` | Tax ID of the studied organism. The default is 9606 (human).
`flank` | A number with the flanking regions around genes to be considered part of the gene i.e. SNPs mapped to them will be considered mapped to the gene.

### Value

A data.frame with two columns: one for the SNP and another for the gene it has been mapped to.

[Package martini version 1.14.0 Index]