granges,Maser-method {maser} | R Documentation

## Retrieve genomic ranges of splicing events from a maser object.

### Description

Retrieve genomic ranges of splicing events from a maser object.

### Usage

    ## S4 method for signature 'Maser'
    granges(x, type = c("A3SS", "A5SS", "SE", "RI", "MXE"), ...)

### Arguments

`x` | a maser object.
`type` | a character indicating the splice type. Possible values are `c("A3SS", "A5SS", "SE", "RI", "MXE")`.
`...` | additional arguments.

### Value

a GRangesList.

### Examples

    path <- system.file("extdata", file.path("MATS_output"), package = "maser")
    hypoxia <- maser(path, c("Hypoxia 0h", "Hypoxia 24h"))
    head(granges(hypoxia, type = "SE"))

[Package maser version 1.12.1 Index]