plotColTile {miaViz} | R Documentation

## Plot factor data as tiles

### Description

Relative relations of two grouping can be visualized by plotting tiles with relative sizes. `plotColTile` and `plotRowTile` can be used for this.

### Usage

    plotColTile(object, x, y, ...)

    plotRowTile(object, x, y, ...)

    ## S4 method for signature 'SummarizedExperiment'
    plotColTile(object, x, y, ...)

    ## S4 method for signature 'SummarizedExperiment'
    plotRowTile(object, x, y, ...)

### Arguments

`object` | a `SummarizedExperiment` object.
`x` | String specifying the column-level metadata field to show on the x-axis. Alternatively, an AsIs vector or data.frame, see `?retrieveFeatureInfo` or `?retrieveCellInfo`. Must result in a returned `character` or `factor` vector.
`y` | String specifying the column-level metadata to show on the y-axis. Alternatively, an AsIs vector or data.frame, see `?retrieveFeatureInfo` or `?retrieveCellInfo`. Must result in a returned `character` or `factor` vector.
`...` | additional arguments for plotting. See `mia-plot-args` for more details i.e. call `help("mia-plot-args")`

### Value

A `ggplot2` object or `plotly` object, if more than one `prevalences` was defined.

### Examples

    data(GlobalPatterns)
    se <- GlobalPatterns
    plotColTile(se,"SampleType","Primer")

[Package miaViz version 1.2.1 Index]