featAbundance {microbiomeExplorer} | R Documentation

## Feature plot module - server

### Description

Feature plot module - server

### Usage

    featAbundance(
      input,
      output,
      session,
      aggDat,
      featLevel,
      intraSettings,
      selectedFeat,
      featName,
      numOfFeats,
      ylabMode,
      normalizedData,
      reset
    )

### Arguments

`input` | shiny input
`output` | shiny output
`session` | shiny session
`aggDat` | aggregated MRExperiment
`featLevel` | chosen feature level (aggregation level)
`intraSettings` | analysis settings passed over from analysis input module
`selectedFeat` | feature selected via drop down element of analysis input
`featName` | plotly click event passed via relative abundance
`numOfFeats` | number of features shown in relative abundance plot (affects plotly click data)
`ylabMode` | character indication if raw \"Reads\" or \"Percentage\" should be shown
`normalizedData` | boolean indicating whether data has been normalized
`reset` | boolean reactive which resets the module if TRUE

### Value

R code needed to build the feature plot

### Author(s)

Janina Reeder

[Package microbiomeExplorer version 1.4.0 Index]