filterMEData {microbiomeExplorer} | R Documentation

## Function to filter the MRexperiment data by numerical parameters

### Description

Function to filter the MRexperiment data by numerical parameters

### Usage

    filterMEData(MRobj, minpresence = 1, minfeats = 2, minreads = 2)

### Arguments

`MRobj` | MRExperiment object to filter
`minpresence` | minimum sample presence per feature
`minfeats` | minimum number of features per sample
`minreads` | minimum number of reads per sample

### Value

the filtered MRobj

### Author(s)

Janina Reeder

### Examples

    data("mouseData", package = "metagenomeSeq")
    filterMEData(MRobj = mouseData, minpresence = 4, minfeats = 300)

[Package microbiomeExplorer version 1.4.0 Index]