alphaDiversity {microbiomeExplorer} | R Documentation

## Alpha Diversity module - server

### Description

Alpha Diversity module - server

### Usage

    alphaDiversity(
      input,
      output,
      session,
      aggDat,
      featLevel,
      intraSettings,
      colorOptions,
      reset
    )

### Arguments

`input` | shiny input
`output` | shiny output
`session` | shiny session
`aggDat` | aggregated MRExperiment
`featLevel` | chosen feature level (aggregation level)
`intraSettings` | analysis settings as passed over from analysis input module
`colorOptions` | phenotype selections: used for color choices
`reset` | boolean reactive which resets the module if TRUE

### Value

R code used to make the alpha diversity plot

### Author(s)

Janina Reeder

[Package microbiomeExplorer version 1.4.0 Index]