aggFeatures {microbiomeExplorer} | R Documentation

## Aggregates counts by level

### Description

This function aggregates counts by a level specified in the featureData slot of the MRexperiment object.

### Usage

    aggFeatures(MRobj, level = NULL, sort = TRUE)

### Arguments

`MRobj` | An MRexperiment object.
`level` | Level to aggregate over. If NULL, no aggregation occurs.
`sort` | boolean determining if resulting aggregated MRexperiment should be sorted based on rowSums; default is TRUE

### Value

Aggregated MRexperiment object or matrix depending on `out`.

### Examples

    data("mouseData", package = "metagenomeSeq")
    aggFeatures(mouseData, level = "genus")

[Package microbiomeExplorer version 1.4.0 Index]