getOmnibusGroups {midasHLA} | R Documentation

## Get omnibus groups from MiDAS object.

### Description

Get omnibus groups from MiDAS object.

### Usage

    getOmnibusGroups(object, experiment)

### Arguments

`object` | `MiDAS` object.
`experiment` | String specifying experiment.

### Details

For some experiments features can be naturally divided into groups (here called omnibus groups). For example, in `"hla_aa"` experiment features can be grouped by amino acid position (`"B_46_E"`, `"B_46_A"`) can be grouped into `B_46` group). Such groups can be then used to perform omnibus test, see `runMiDAS` for more details.

### Value

List of omnibus groups for a given experiment.

### Examples

    getOmnibusGroups(object = MiDAS_tut_object,
                     experiment = "hla_aa")

[Package midasHLA version 1.2.0 Index]