MiDAS_tut_object {midasHLA} | R Documentation

## MiDAS tutorial MiDAS object

### Description

Example MiDAS object created with data used in MiDAS tutorial: `MiDAS_tut_HLA`, `MiDAS_tut_KIR`, `MiDAS_tut_pheno`. Used in code examlpes and unit tests.

### Usage

    MiDAS_tut_object

### Format

MiDAS object with following experiments defined:

hla_alleles

  SummarizedExperiment with 447 rows and 1000 columns

hla_aa

  SummarizedExperiment with 1223 rows and 1000 columns

hla_g_groups

  SummarizedExperiment with 46 rows and 1000 columns

hla_supertypes

  SummarizedExperiment with 12 rows and 1000 columns

hla_NK_ligands

  SummarizedExperiment with 5 rows and 1000 columns

kir_genes

  SummarizedExperiment with 16 rows and 1000 columns

kir_haplotypes

  SummarizedExperiment with 6 rows and 1000 columns

hla_kir_interactions

  SummarizedExperiment with 29 rows and 1000 columns

hla_divergence

  matrix with 4 rows and 1000 columns

hla_het

  SummarizedExperiment with 9 rows and 1000 columns

[Package midasHLA version 1.2.0 Index]