net_dis_plot {mina} | R Documentation

## Visulization of network distance, average distances are used for tile plot.

### Description

Visulization of network distance, average distances are used for tile plot.

Visulization of network distance, average distances are used for tile plot.

### Usage

    net_dis_plot(x, d = "BS", ...)

    ## S4 method for signature 'mina'
    net_dis_plot(x, d = "BS", sig = TRUE)

### Arguments

`x` | An object of 'mina' with slot 'dis_stat' defined.
`d` | The distance to be plotted, could be "BS" or "PM".
`...` | Additional parameters.
`sig` | If 'TRUE', indicating significant distance with gold guild.

### Value

p The plotted figure.

p The plotted figure.

### Examples

    maize <- new("mina", tab = maize_asv2, des = maize_des2)
    maize <- norm_tab(maize, method = "raref")
    maize <- fit_tabs(maize)
    maize <- bs_pm(maize, group = "Compartment")
    maize <- net_dis(maize, method = "Jaccard")
    p <- net_dis_plot(maize)
    maize <- new("mina", tab = maize_asv2, des = maize_des2)
    maize <- norm_tab(maize, method = "raref")
    maize <- fit_tabs(maize)
    maize <- bs_pm(maize, group = "Compartment")
    maize <- net_dis(maize, method = "Jaccard")
    p <- net_dis_plot(maize, d = "BS")

[Package mina version 1.2.0 Index]