net_dis {mina} | R Documentation

## Calculate the network distance of 'multi' and test the significance when 'perm' is defined.

### Description

Calculate the network distance of 'multi' and test the significance when 'perm' is defined.

### Usage

    net_dis(x, method, ...)

### Arguments

`x` | An object of class 'mina' with 'multi' (and 'perm' if 'sig' is TRUE) defined.
`method` | The distance to be calculated, "spectra" and "Jaccard" are available.
`...` | Additional parameters.

### Value

The netowrk comparison result.

### Examples

    maize <- new("mina", tab = maize_asv2, des = maize_des2)
    maize <- norm_tab(maize, method = "raref")
    maize <- fit_tabs(maize)
    maize <- get_rep(maize, top = 5)
    maize <- bs_pm(maize, group = "Compartment")
    maize <- net_dis(maize, method = "spectra", evk = 30)

[Package mina version 1.2.0 Index]