norm_tab,mina,ANY-method {mina} | R Documentation

## Normalize the quantitative table with mina input.

### Description

Normalize the quantitative table with mina input.

### Usage

    ## S4 method for signature 'mina,ANY'
    norm_tab(x, method, depth = 1000, replace = TRUE, multi = 1, ...)

    ## S4 method for signature 'mina,character'
    norm_tab(x, method, depth = 1000, replace = TRUE, multi = 1, ...)

### Arguments

`x` | An object of the class mina with @tab defined.
`method` | The method used for normalization.
`depth` | The depth for subsampling by rarefying, 1000 by default.
`replace` | Whether to sample with replacement (`TRUE` by default) or without replacement (`FALSE`) when using method 'raref'.
`multi` | Rarefy the table for multiple times, FALSE by default, indicate the times of rarefaction want to be repeated, only validate for rarefaction.
`...` | Additional parameters.

### Value

x An object of the class mina with @norm added.

### Examples

    maize <- new("mina", tab = maize_asv2, des = maize_des2)
    maize <- norm_tab(maize, method = "raref", depth = 1000, replace = TRUE,
    multi = 3)

[Package mina version 1.2.0 Index]