bs_pm {mina} | R Documentation

## Inferring the network of different group of samples and test significance by permutation.

### Description

Inferring the network of different group of samples and test significance by permutation.

### Usage

    bs_pm(x, group, ...)

### Arguments

`x` | An object of class 'mina' with 'norm' and 'des' defined.
`group` | The column name of descriptive file 'des' for comparison.
`...` | Additional parameters.

### Value

The network bootstrap and permutation result.

### Examples

    maize <- new("mina", tab = maize_asv2, des = maize_des2)
    maize <- norm_tab(maize, method = "raref")
    maize <- fit_tabs(maize)
    maize <- get_rep(maize, top = 5)
    maize <- bs_pm(maize, group = "Compartment", per = 0.5)

[Package mina version 1.2.0 Index]