miRandaIntersect {mirTarRnaSeq} | R Documentation

## miRandaIntersect Looks for Intersection of Significant output results with miRanda Results from getInputSpeciesDF function

### Description

Compares and looks for intersection if significant output results with miRanda Results from getInputSpeciesDF and outputs a final filtered output for only those pairs of miRNA and mRNA which have actually been predicted to be targets in miRanda file function

### Usage

    miRandaIntersect(sig_corrs, corrS, mRNA, miRNA, getInputSpeciesDF)

### Arguments

`sig_corrs` | correlation matrix, produced by threshSig.
`corrS` | vector of correlations/differences, from the sampCorRnaMirna function.
`mRNA` | mRNA FC matrix.
`miRNA` | miRNA FC matrix.
`getInputSpeciesDF` | miranda data, produced by getInputSpecies.

### Value

An object containing data.frames of significant mRNA, miRNA and correlation matrix filtered by miRanda input.

### Examples

    x <- miRandaIntersect(sig_InterR, outs2, mRNA_fc, miRNA_fc, miRandaM)

[Package mirTarRnaSeq version 1.2.0 Index]