spike_df {monocle} | R Documentation

## Spike-in transcripts data.

### Description

A dataset containing the information for the 92 ERCC spikein transcripts (This dataset is based on the data from the Nature paper from Stephen Quake group)

### Usage

    spike_df

### Format

A data frame with 92 rows and 9 variables:

ERCC_ID

  ID for ERCC transcripts

subgroup

  Subgroup for ERCC transcript

conc_attomoles_ul_Mix1

  Contration of Mix 1 (attomoles / ul)

conc_attomoles_ul_Mix2

  Contration of Mix 2 (attomoles / ul)

exp_fch_ratio

  expected fold change between mix 1 over mix 2

numMolecules

  number of molecules calculated from concentration and volume

rounded_numMolecules

  number in rounded digit of molecules calculated from concentration and volume

[Package monocle version 2.22.0 Index]