run_fabia {mosbi} | R Documentation

## Run the fabia biclustering algorithm

### Description

The function executes the fabia biclustering algorithm, returning a list of biclusters converted into bicluster objects compatible with this package. If the algorithm fails to run, an empty list is returned.

### Usage

    run_fabia(
      data_matrix,
      minRow = 2,
      minCol = 2,
      thresZ = 0.5,
      thresL = NULL,
      ...
    )

### Arguments

`data_matrix` | A numeric matrix.
`minRow` | Same parameters as in filter_bicluster_size.
`minCol` | Same parameters as in filter_bicluster_size.
`thresZ` | See parameter from the extractBic function.
`thresL` | See parameter from the extractBic function.
`...` | Other parameters forwarded to the fabia function.

### Value

a list of bicluster objects.

### Examples

    m <- matrix(seq(1:16), nrow=4)
    # m <- matrix(rnorm(1000), nrow=10)
    # run_fabia(m, p=5)

[Package mosbi version 1.0.3 Index]