motifSig-class {motifStack} | R Documentation

## Class `"motifSig"`

### Description

An object of class `"motifSig"` represents the output of function motifSignature

methods for motifSig objects.

### Usage

    signatures(object)

    frequence(object)

    nodelist(object)

    sigColor(object)

    ## S4 method for signature 'motifSig'
    x$name

### Arguments

`object` | An object of class `motifSig`.
`x` | A motifSig object
`name` | slot name of motifSig object

### Objects from the Class

Objects can be created by calls of the form `new("motifSig", signature, freq, nodelist, gpcol)`.

### Methods

signatures

  `signature(object = "motifSig")` return the signatures of motifSig

frequence

  `signature(object = "motifSig")` return the frequency of motifSig

nodelist

  `signature(object = "motifSig")` return the nodelist of motifSig

sigColor

  `signature(object = "motifSig")` return the group color sets of motifSig

$, $<-

  Get or set the slot of `motifSig`

[Package motifStack version 1.38.0 Index]