Getfiles {msPurity} | R Documentation

## Get files for DI-MS processing

### Description

Takes in a folder path and outputs the a data frame structure for purityD. Function modified from mzmatch.

### Usage

    Getfiles(
      projectFolder = NULL,
      recursive = FALSE,
      pattern = ".csv",
      check = TRUE,
      raw = FALSE,
      peakout = NA,
      cStrt = TRUE,
      mzml_out = FALSE
    )

### Arguments

`projectFolder` | character; Directory path
`recursive` | boolean; Recursively check for files
`pattern` | character; File suffix to check for
`check` | boolean; Check with a GUI the files
`raw` | (REDUNDANT)
`peakout` | (REDUNDANT)
`cStrt` | boolean; Use the first word as the class name for files
`mzml_out` | (REDUNDANT)

### Value

dataframe of files

### Examples

    datapth <- system.file("extdata", "dims", "mzML", package="msPurityData")
    inDF <- Getfiles(datapth, pattern=".mzML", check = FALSE, cStrt = FALSE)

[Package msPurity version 1.20.0 Index]