358bfdd5ddc2b5d9cfb07e85b931d235 *CITATION
f493a6f60783aa41de4031592ebead67 *DESCRIPTION
367ae3f947b25ef82e55d98e233ae6ac *INDEX
1ebbd3e34237af26da5dc08a4e440464 *LICENSE
e0b50232247dd6a294f614d26cedc6cd *Meta/Rd.rds
8503e676975364d771072956cdbca633 *Meta/features.rds
6a183be2f34f630026074d2ebf7cdc14 *Meta/hsearch.rds
bf90fa6653b45c1d5e8a4640e3136055 *Meta/links.rds
696f3c03fe232da6b00cf78a1691db24 *Meta/nsInfo.rds
4a7b3baa14391382162f53b08b0a9401 *Meta/package.rds
ed08b562c92eb4ab7973fa14191d89f2 *Meta/vignette.rds
12acb6d6d06f347e4c20260ad60fa50b *NAMESPACE
398ba4702df063286c49d3b716bf7ed3 *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/msPurity
02e2a33d27e70050070f8d09a8983bd8 *R/msPurity.rdb
569195d603bb1bc1e66f7a8dfbb6dd62 *R/msPurity.rdx
5822dba448e804f8020a8649d1eec8f1 *doc/index.html
6f3e4902bf2eb526698965922f558b36 *doc/msPurity-lcmsms-data-processing-and-spectral-matching-vignette.R
6cd17e3e5b7c2878d3afa3e36ff82394 *doc/msPurity-lcmsms-data-processing-and-spectral-matching-vignette.Rmd
92a7c0cb0b24355a2189ae25a3a83adb *doc/msPurity-lcmsms-data-processing-and-spectral-matching-vignette.html
faa6765edda45e5426c02da8ae61b465 *doc/msPurity-spectral-database-vignette.R
850dc79856edcba75cf055d2f2de6b72 *doc/msPurity-spectral-database-vignette.Rmd
def118567ac9ba68f35d94d78495a745 *doc/msPurity-spectral-database-vignette.html
fc81cef9bc8f5273acd28ab59f0153dc *doc/msPurity-vignette.R
cba16f1352b6d4ffd10ca93a15e5d95f *doc/msPurity-vignette.Rmd
1b8f71e37401ffa0009d765b507a1761 *doc/msPurity-vignette.html
4d1dc9859bd1b56bae64850c59a1b48f *extdata/iwqe5.rds
3a0c62df2b4f1bd3554273e59b3eeb65 *extdata/tests/db/createDatabase_example.sqlite
c9341720b46539297cf8769d1067534d *extdata/tests/db/createDatabase_example_OLD.sqlite
7172d02d03b6c8422816d57330e0dfd9 *extdata/tests/db/create_database_example.sqlite
5a77e931eead5256d48ebf3d4a87f90f *extdata/tests/db/metab_compound_subset.sqlite
06b90f52aa4b571ad98ad01484f83aca *extdata/tests/external_annotations/beams.tsv
8b6b0eb06c238f5731b4a7333fa73d40 *extdata/tests/external_annotations/combined.tsv
a001986ae68b5263924ee8692228013d *extdata/tests/external_annotations/metfrag.tsv
8084e6cfcd0dffb25be890454dd7f5a6 *extdata/tests/external_annotations/probmetab.tsv
48bdf9d70753982fe4d309ee77365728 *extdata/tests/external_annotations/sirus_csifingerid.tsv
76c346510cfdaa957b30b57e0855629b *extdata/tests/msp/all.msp
a120acd45576f0dc192f65cb23aa48c6 *extdata/tests/msp/all_OLD.msp
3ee0fffb98ffe82f3c20e19c7f04b138 *extdata/tests/msp/av_all.msp
e377f131a38e9fa9f827df456d38a8a1 *extdata/tests/msp/av_all_OLD.msp
3d4e4eb59f03ada6826637eae645d4f3 *extdata/tests/msp/av_all_dupmeta.msp
84b9537c7331bab4de412ae743cec069 *extdata/tests/msp/av_all_dupmeta_OLD.msp
e2013207cf6ed777a0f8d20649140344 *extdata/tests/msp/av_all_include_adducts.msp
f0430bf40be494a87ee79d4e7a3cec03 *extdata/tests/msp/av_inter.msp
1cfe53065547725219cf41c7ed083e52 *extdata/tests/msp/av_inter_OLD.msp
6fa4ffeb4a9461b5dfb1fd1a6060ece7 *extdata/tests/msp/av_intra.msp
95b4696702a0593b3d143bf11e9bd248 *extdata/tests/msp/av_intra_OLD.msp
07e1ce1d0a40901a3263636276afbcc1 *extdata/tests/msp/max.msp
400c5e261a650c8950bed40c93266f66 *extdata/tests/msp/max_OLD.msp
4d16988c2fed2e2e5e4a21aeb16e23d5 *extdata/tests/msp/recrdt.msp
66503ac2caabbd1cea8008cebeb4c03d *extdata/tests/msp/recrdt_OLD.msp
eb67185ff16b1fc111568360b7414780 *extdata/tests/purityA/10_input_filterflagremove.rds
cffc0944cfba9d5695c88e1dac5a7965 *extdata/tests/purityA/1_purityA_pa.rds
e9bf61642ccf6d648e6ab6f5a844b08e *extdata/tests/purityA/1_purityA_pa_OLD.rds
fb0abc3e64554374791a16c1d33dd817 *extdata/tests/purityA/2_frag4feature_pa.rds
26401fdf85e36a3f2969ec080efc9314 *extdata/tests/purityA/2_frag4feature_pa_OLD.rds
00d05ef91f6c3482f863f29a558e46fc *extdata/tests/purityA/3_filterFragSpectra_pa.rds
93ebf6e82799ba850eab7f54bb47aa6f *extdata/tests/purityA/3_filterFragSpectra_pa_OLD.rds
aaa410196d3afa6c867052bd869e3af7 *extdata/tests/purityA/4_averageIntraFragSpectra_no_filter_pa.rds
f8fbcd38d61aa13a29b356a3fb3e331c *extdata/tests/purityA/4_averageIntraFragSpectra_no_filter_pa_OLD.rds
c81cb17659904e99425e62e1882942f4 *extdata/tests/purityA/5_averageInterFragSpectra_no_filter_pa.rds
4c2d83ff58f6d405bb7c051a992fa023 *extdata/tests/purityA/5_averageInterFragSpectra_no_filter_pa_OLD.rds
54b34bde46bb7937de4fc82f4bdc0051 *extdata/tests/purityA/6_averageAllFragSpectra_no_filter_pa.rds
0b4df12daf6170d44a93908c9dd522be *extdata/tests/purityA/6_averageAllFragSpectra_no_filter_pa_OLD.rds
bfd1606112292c498b2c941e5bea359c *extdata/tests/purityA/7_averageIntraFragSpectra_with_filter_pa.rds
e8b70eb8f9f72a82a68ebe255257a266 *extdata/tests/purityA/7_averageIntraFragSpectra_with_filter_pa_OLD.rds
cb9cc7dbfd28a736fde4b39c04985461 *extdata/tests/purityA/8_averageInterFragSpectra_with_filter_pa.rds
5477c033f2d82b40aafbae8cf3ca3648 *extdata/tests/purityA/8_averageInterFragSpectra_with_filter_pa_OLD.rds
a5d0ef013af49522166793cbc2526b3d *extdata/tests/purityA/9_averageAllFragSpectra_with_filter_pa.rds
df4da0a5b7a4341b3fcddcf82a3a1a1c *extdata/tests/purityA/9_averageAllFragSpectra_with_filter_pa_OLD.rds
1c715efcc3c7605f9ac568f82c40e660 *extdata/tests/purityX/1_purityX_grouped_px.rds
c2406f82a9781b08b4762fdadf723422 *extdata/tests/purityX/1_purityX_single_px.rds
13a3cf52bbfe0fbd3819422643dd2483 *extdata/tests/sm/spectralMatching_result.sqlite
13a3cf52bbfe0fbd3819422643dd2483 *extdata/tests/sm/spectralMatching_result_OLD.sqlite
72555d9f0683e969d33d58e1001a3c1f *extdata/tests/sm/spectral_matching_result.sqlite
9a4b323c433f986cf7f19d299e7de893 *extdata/tests/xcms/ms_only_xcmsnexp.rds
daca2c577b19cfeafd19fd3bf737499b *extdata/tests/xcms/ms_only_xset_OLD.rds
e4adb76d83af12318b599d7ff66e79b6 *extdata/tests/xcms/msms_only_xcmsnexp.rds
88629ba20a961071bbd47348a868d54d *extdata/tests/xcms/msms_only_xset.rds
652360d745f1d2dccc46de82c4ee0b0b *extdata/tests/xcms/msms_only_xset_OLD.rds
74a5773009f6a5cfd644bb270c5b96f5 *help/AnIndex
c901fcff9ae2d57028d9978bd33aaab4 *help/Getfiles.html
713ece57bc488c384cabe383cac3194d *help/aliases.rds
ceada8855adf6a46ad24f964018e256c *help/assessPuritySingle.html
5a73b008f2a400b021c1389616a50ecf *help/averageAllFragSpectra+2CpurityA-method.html
5a73b008f2a400b021c1389616a50ecf *help/averageAllFragSpectra-purityA-method.html
5a73b008f2a400b021c1389616a50ecf *help/averageAllFragSpectra.html
6c69e97e4819a647c068bfc215a9dbee *help/averageInterFragSpectra+2CpurityA-method.html
6c69e97e4819a647c068bfc215a9dbee *help/averageInterFragSpectra-purityA-method.html
6c69e97e4819a647c068bfc215a9dbee *help/averageInterFragSpectra.html
891f285ff0d81769d50dbfdceda2d1f0 *help/averageIntraFragSpectra+2CpurityA-method.html
891f285ff0d81769d50dbfdceda2d1f0 *help/averageIntraFragSpectra-purityA-method.html
891f285ff0d81769d50dbfdceda2d1f0 *help/averageIntraFragSpectra.html
62f8a75d2dde7da4e55273640b5ff91b *help/averageSpectra+2CpurityD-method.html
62f8a75d2dde7da4e55273640b5ff91b *help/averageSpectra-purityD-method.html
62f8a75d2dde7da4e55273640b5ff91b *help/averageSpectra.html
52e861287bddc39c89277a60ddf03b64 *help/averageSpectraSingle.html
7a9c453323a1d13c2526456dd1198d96 *help/combineAnnotations.html
391106ccd49e4b09ee104e22797bd39c *help/createDatabase.html
0875c3fec6f13abd0f472df7729b3367 *help/createMSP+2CpurityA-method.html
0875c3fec6f13abd0f472df7729b3367 *help/createMSP-purityA-method.html
0875c3fec6f13abd0f472df7729b3367 *help/createMSP.html
0de1695acc1cd683782b283a1e6a039b *help/create_database.html
9eeffb53dd52b20a779588fa22e71a6c *help/dimsPredictPurity+2CpurityD-method.html
9eeffb53dd52b20a779588fa22e71a6c *help/dimsPredictPurity-purityD-method.html
9eeffb53dd52b20a779588fa22e71a6c *help/dimsPredictPurity.html
cf2ec7cb3d590563b0d51377930e903c *help/dimsPredictPuritySingle.html
65d1d9d89385eaf14c370bfeb247917e *help/filterFragSpectra+2CpurityA-method.html
65d1d9d89385eaf14c370bfeb247917e *help/filterFragSpectra-purityA-method.html
65d1d9d89385eaf14c370bfeb247917e *help/filterFragSpectra.html
e95ac0bbd62fbaa2f374221388a398a6 *help/filterp+2CpurityD-method.html
e95ac0bbd62fbaa2f374221388a398a6 *help/filterp-purityD-method.html
e95ac0bbd62fbaa2f374221388a398a6 *help/filterp.html
240985304909fe681d83e2db1583022f *help/flag_remove.html
65b52376f7a6f465f000d9fe632b0cdb *help/frag4feature+2CpurityA-method.html
65b52376f7a6f465f000d9fe632b0cdb *help/frag4feature-purityA-method.html
65b52376f7a6f465f000d9fe632b0cdb *help/frag4feature.html
e16da28df6871a9a59ba3022eb02b786 *help/getP+2CpurityD-method.html
e16da28df6871a9a59ba3022eb02b786 *help/getP-purityD-method.html
e16da28df6871a9a59ba3022eb02b786 *help/getP.html
371f0a48c68ee022ea9c7a95ba274825 *help/get_additional_mzml_meta.html
8820ea14a86e54bb4699996f6f2fc1b5 *help/groupPeaks+2CpurityD-method.html
8820ea14a86e54bb4699996f6f2fc1b5 *help/groupPeaks-purityD-method.html
8820ea14a86e54bb4699996f6f2fc1b5 *help/groupPeaks.html
79e1e4c1214e873eeabb30d9591e3d96 *help/groupPeaksEx.html
8ef83dbdb52b14edb8b07d878ef6d705 *help/initialize+2CpurityD-method.html
8ef83dbdb52b14edb8b07d878ef6d705 *help/initialize-purityD-method.html
ad52d174a5fffe12233ede73b1c3a4c9 *help/iwNormGauss.html
a324051ecef8608febcb92d3a2060234 *help/iwNormQE.5.html
147cd5e80c3fff81bb8220c26480df3c *help/iwNormRcosine.html
5fc409b75708dd990084903733c43f03 *help/msPurity.html
54c559928a72e9cd2bffe72d740b35de *help/msPurity.rdb
f5ca07860a9c40ba58722d5b7b6db261 *help/msPurity.rdx
2a14e9cf5e5801d3a990197d392d0d66 *help/paths.rds
af9029500b86da0b406cb4f549739812 *help/pcalc.html
d2887d4ffd65f1323b23359c3088b008 *help/purityA.html
5433aabf8c8b1cd1a3c6bd991b317753 *help/purityD-class.html
5433aabf8c8b1cd1a3c6bd991b317753 *help/purityD.html
f284c8e86d0bdbb0b648d23c926fc569 *help/purityX.html
99412b641018d402917bee596d766fd4 *help/show+2CpurityA-method.html
91d00b7d99dc2cf6b6989d4781eaec33 *help/show+2CpurityD-method.html
bb0098dc8a4331892d35429e3e2e4891 *help/show+2CpurityX-method.html
99412b641018d402917bee596d766fd4 *help/show-purityA-method.html
91d00b7d99dc2cf6b6989d4781eaec33 *help/show-purityD-method.html
bb0098dc8a4331892d35429e3e2e4891 *help/show-purityX-method.html
a153ee6ce8f5e782e15c87db5ffedf8a *help/spectralMatching.html
3359b8484a0525ab7f036941e3a5aca2 *help/spectral_matching.html
cec6c76c20054e4e8c2d4d9d7c123420 *help/subtract+2CpurityD-method.html
cec6c76c20054e4e8c2d4d9d7c123420 *help/subtract-purityD-method.html
cec6c76c20054e4e8c2d4d9d7c123420 *help/subtract.html
bbca85a8ac5fdb497eea81bac03b762d *help/subtractMZ.html
b8fac5ea1103f12a5673cb084614e5eb *help/validate+2CpurityA-method.html
b8fac5ea1103f12a5673cb084614e5eb *help/validate-purityA-method.html
b8fac5ea1103f12a5673cb084614e5eb *help/validate.html
6ad7d1e7261b5a01a85a16b010a78591 *help/writeOut+2CpurityD-method.html
6ad7d1e7261b5a01a85a16b010a78591 *help/writeOut-purityD-method.html
6ad7d1e7261b5a01a85a16b010a78591 *help/writeOut.html
15f3bf8b62864151388ede9afe01cd66 *html/00Index.html
16fdb207c22509c8b7c67f217d59ab28 *html/Getfiles.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
03f7b19d4e595dd0797ffd2cbcdab14c *html/assessPuritySingle.html
8d1853f32707124196cb4b2c46e7c85f *html/averageAllFragSpectra-purityA-method.html
38a24ebce2dc40b2fd68d50637257b05 *html/averageInterFragSpectra-purityA-method.html
61835f25be1fa2bc31a74db76c31fbbb *html/averageIntraFragSpectra-purityA-method.html
697537416d3433fc27f566c091e91e52 *html/averageSpectra-purityD-method.html
5f0237d9c92ce5032d04362be8e52afd *html/averageSpectraSingle.html
bda1e05770cc709d088073c3a414667d *html/combineAnnotations.html
5b7440debbe9dbc732409201c685e400 *html/createDatabase.html
f217ccd377ef29f6ca11dd387c457b17 *html/createMSP-purityA-method.html
1856e2b9749cd8eaf3b898d31465366d *html/create_database.html
40011888a17a3e4046543625f3e389a0 *html/dimsPredictPurity-purityD-method.html
c957eba4d70855a61a6ea06d0ee21741 *html/dimsPredictPuritySingle.html
f91f94cd6e9210bccf8b368dcff10875 *html/filterFragSpectra-purityA-method.html
0fcc3cd888f3531bf96b26dd252ff9b9 *html/filterp-purityD-method.html
776cfa90839b1010b3bc4b52c3a88bf7 *html/flag_remove.html
e6cd185072c150c04fd0dc3dcde64206 *html/frag4feature-purityA-method.html
01c651b366460cfca4d5436907287f6f *html/getP-purityD-method.html
6f22978a21617ec1355a94c5b5a94171 *html/get_additional_mzml_meta.html
aefcf3f38b60209eb57b9d6177cd1de7 *html/groupPeaks-purityD-method.html
e794c4ecff5a07308c5959f9d5fc9d21 *html/groupPeaksEx.html
424c093494033b4cbce201ed0c925860 *html/initialize-purityD-method.html
2e7158490c3a5b3c324eba09075065a8 *html/iwNormGauss.html
dff2a9e8efa0ab24b4c1be4b67002143 *html/iwNormQE.5.html
a96dec6f1f9ffa77118535d7e198c23f *html/iwNormRcosine.html
933c62432271a709f78528f025ef49ad *html/msPurity.html
fbd5436684903e4b465402c131852352 *html/pcalc.html
17ca763e11e05812268e172497e63915 *html/purityA.html
bc5cbf6862bca7b63c80e6209d29440c *html/purityD-class.html
4d73ffd9a72e222415f11deb93ef1431 *html/purityX.html
1f695103afbb08d59327ab17c89e5ad2 *html/show-purityA-method.html
6296a427b4721661dd89524aadd62e8b *html/show-purityD-method.html
fa065bdca932ca48592c97d0d77e0866 *html/show-purityX-method.html
ed2abed2af3eeb9b696ee46c8f0d337a *html/spectralMatching.html
5c9fa7d7f719ac858d9cc59b8fe9cf6c *html/spectral_matching.html
be0d7c610b33f756b75ef91f8a55a762 *html/subtract-purityD-method.html
aabb83e3a2a3e08451a5396aff39f63f *html/subtractMZ.html
924e381efb27e9e7b8a658c37dcd9423 *html/validate-purityA-method.html
8ed639ea0a84e41d531026bcda7cfeae *html/writeOut-purityD-method.html
