HCT116_r1 {multiHiCcompare} | R Documentation

## A 4 column sparse matrix for a Hi-C matrix.

### Description

A matrix object with 4 columns and 56603 rows. Sample 1 of 7 included as example Hi-C data. This is replicate 1 of HCT-116 cell line at 100KB resolution from chHCT116_r22.

### Usage

    HCT116_r1

### Format

An object of class `data.frame` with 56603 rows and 4 columns.

### Value

A matrix

### Source

Data from Rao 2017. See their website at http://www.aidenlab.org/ Or the the GEO link to download the data https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE104888

[Package multiHiCcompare version 1.12.0 Index]