plot_karyogram {multicrispr} | R Documentation

## Karyo/Interval Plot GRanges(List)

### Description

Karyo/Interval Plot GRanges(List)

### Usage

    plot_karyogram(grlist, title = unique(genome(grlist)))

### Arguments

`grlist` | `GRanges-class`
`title` | plot title

### Value

list

### See Also

`plot_intervals`

### Examples

    # Plot GRanges
        bedfile <-  system.file('extdata/SRF.bed',  package = 'multicrispr')
        gr <- bed_to_granges(bedfile, 'mm10', plot = FALSE)
        plot_karyogram(gr)

    # Plot GRangesList
        flanks  <- up_flank(gr, stranded=FALSE)
        grlist <- GenomicRanges::GRangesList(sites = gr, flanks = flanks)
        plot_karyogram(grlist)

[Package multicrispr version 1.4.3 Index]