sample	type	algorithm	chr	start	end	size	zygosity	score	smapId	linkSmapId
1_bsssi_sop	inv	assembly_comparison	1	13193344	13347724	-1	heterozygous	0.04	85	86
1_bsssi_sop	inv	assembly_comparison	1	16948614	17226579	-1	heterozygous	0.14	93	94
1_bsssi_sop	inv	assembly_comparison	1	16948614	17215695	-1	heterozygous	0.44	96	97
1_bsssi_sop	inv	assembly_comparison	1	16981590	16981590	-1	unknown	0.00	98	99
1_bsssi_sop	inv	assembly_comparison	1	16981590	16981590	-1	unknown	0.00	100	101
1_bsssi_sop	inv	assembly_comparison	1	16985146	17020555	-1	heterozygous	0.20	103	104
1_bsssi_sop	inv	assembly_comparison	1	16985146	17198882	-1	heterozygous	0.63	105	106
1_bsssi_sop	inv	assembly_comparison	1	16985146	17020555	-1	heterozygous	0.14	107	108
1_bsssi_sop	inv	assembly_comparison	1	16985146	17198882	-1	heterozygous	0.46	109	110
1_bsssi_sop	inv	assembly_comparison	1	17060250	17215695	-1	heterozygous	0.00	115	116
1_bsssi_sop	inv	assembly_comparison	1	104247462	104247462	-1	heterozygous	0.99	284	285
1_bsssi_sop	inv	assembly_comparison	1	104283885	104283885	-1	heterozygous	0.99	285	284
1_bsssi_sop	inv	assembly_comparison	1	142917492	143121423	-1	homozygous	0.08	320	321
1_bsssi_sop	inv	assembly_comparison	1	143281139	143345491	-1	homozygous	0.46	322	323
1_bsssi_sop	inv	assembly_comparison	1	143281139	143345491	-1	homozygous	0.54	324	325
1_bsssi_sop	inv	assembly_comparison	1	143281139	143345491	-1	homozygous	0.26	326	327
1_bsssi_sop	inv	assembly_comparison	1	144084593	148734879	-1	heterozygous	0.03	333	334
1_bsssi_sop	inv	assembly_comparison	1	144084593	148734879	-1	heterozygous	0.00	336	337
1_bsssi_sop	inv	assembly_comparison	1	144614230	149611886	-1	heterozygous	0.11	342	343
1_bsssi_sop	inv	assembly_comparison	1	144614230	144949481	-1	heterozygous	0.09	344	345
1_bsssi_sop	inv	assembly_comparison	1	144615912	144949481	-1	heterozygous	0.00	346	347
1_bsssi_sop	inv	assembly_comparison	1	144949481	144949481	-1	unknown	0.36	351	352
1_bsssi_sop	inv	assembly_comparison	1	144954191	144954191	-1	unknown	0.00	355	356
1_bsssi_sop	inv	assembly_comparison	1	145308850	146310903	-1	heterozygous	0.00	365	366
1_bsssi_sop	inv	assembly_comparison	1	145380410	146310903	-1	heterozygous	0.00	368	369
1_bsssi_sop	inv	assembly_comparison	1	148681901	148790554	-1	heterozygous	0.00	374	375
1_bsssi_sop	inv	assembly_comparison	1	148681901	148790554	-1	heterozygous	0.00	378	379
1_bsssi_sop	inv	assembly_comparison	1	205920514	206074146	-1	homozygous	0.21	461	462
1_bsssi_sop	inv	assembly_comparison	1	205920514	206074146	-1	homozygous	0.33	466	467
1_bsssi_sop	inv	assembly_comparison	1	206278787	206483844	-1	homozygous	0.12	469	470
1_bsssi_sop	inv	assembly_comparison	1	206313672	206483844	-1	homozygous	0.11	472	473
1_bsssi_sop	inv	assembly_comparison	1	228770361	228770361	-1	homozygous	0.99	514	515
1_bsssi_sop	inv	assembly_comparison	1	228770361	228772586	-1	homozygous	0.99	515	514
1_bsssi_sop	inv	assembly_comparison	1	228759157	228759157	-1	homozygous	0.99	544	545
1_bsssi_sop	inv	assembly_comparison	1	228759157	228761399	-1	homozygous	0.99	545	544
1_bsssi_sop	inv	assembly_comparison	1	228759157	228759157	-1	homozygous	0.99	546	547
1_bsssi_sop	inv	assembly_comparison	1	228759157	228761399	-1	homozygous	0.99	547	546
1_bsssi_sop	inv	assembly_comparison	1	248670482	248685145	-1	homozygous	0.99	628	629
1_bsssi_sop	inv	assembly_comparison	1	248691576	248704176	-1	homozygous	0.99	629	628
1_bsssi_sop	inv	assembly_comparison	2	89126878	89879961	-1	heterozygous	0.00	802	803
1_bsssi_sop	inv	assembly_comparison	2	89143395	89879961	-1	heterozygous	0.06	809	810
1_bsssi_sop	inv	assembly_comparison	2	89126878	89879961	-1	heterozygous	0.26	813	814
1_bsssi_sop	inv	assembly_comparison	2	89627438	91760315	-1	heterozygous	0.03	818	819
1_bsssi_sop	inv	assembly_comparison	2	89627438	91760315	-1	heterozygous	0.02	822	823
1_bsssi_sop	inv	assembly_comparison	2	89627438	91760315	-1	heterozygous	0.06	825	826
1_bsssi_sop	inv	assembly_comparison	2	89938883	91760315	-1	homozygous	0.00	827	828
1_bsssi_sop	inv	assembly_comparison	2	89948972	91760315	-1	homozygous	0.00	830	831
1_bsssi_sop	inv	assembly_comparison	2	89948972	91760315	-1	homozygous	0.00	832	833
1_bsssi_sop	inv	assembly_comparison	2	89983069	91760315	-1	homozygous	0.00	834	835
1_bsssi_sop	inv	assembly_comparison	2	91911181	91911181	-1	heterozygous	0.00	838	839
1_bsssi_sop	inv	assembly_comparison	2	91911181	91911181	-1	heterozygous	0.00	841	842
1_bsssi_sop	inv	assembly_comparison	2	92027177	92146711	-1	homozygous	0.33	843	844
1_bsssi_sop	inv	assembly_comparison	2	96152784	96152784	-1	homozygous	0.99	846	847
1_bsssi_sop	inv	assembly_comparison	2	96255484	96255484	-1	homozygous	0.99	847	846
1_bsssi_sop	inv	assembly_comparison	2	96152784	96152784	-1	homozygous	0.99	849	850
1_bsssi_sop	inv	assembly_comparison	2	96255484	96255484	-1	homozygous	0.99	850	849
1_bsssi_sop	inv	assembly_comparison	2	243091036	243165708	-1	homozygous	0.34	1057	1058
1_bsssi_sop	inv	assembly_comparison	2	243091036	243165708	-1	homozygous	0.28	1062	1063
1_bsssi_sop	inv	assembly_comparison	4	49121920	49301553	-1	homozygous	0.00	1438	1439
1_bsssi_sop	inv	assembly_comparison	5	17587983	17587983	-1	homozygous	0.02	1749	1750
1_bsssi_sop	inv	assembly_comparison	5	69673110	69827300	-1	homozygous	0.00	1819	1820
1_bsssi_sop	inv	assembly_comparison	5	69673110	70069550	-1	homozygous	0.00	1821	1822
1_bsssi_sop	inv	assembly_comparison	6	26771171	26817363	-1	heterozygous	0.43	2055	2056
1_bsssi_sop	inv	assembly_comparison	6	62121540	62190630	-1	heterozygous	0.01	2147	2148
1_bsssi_sop	inv	assembly_comparison	6	62121540	62301447	-1	heterozygous	0.00	2149	2150
1_bsssi_sop	inv	assembly_comparison	7	923686	923686	-1	heterozygous	0.99	2364	2365
1_bsssi_sop	inv	assembly_comparison	7	944827	946655	-1	heterozygous	0.99	2365	2364
1_bsssi_sop	inv	assembly_comparison	7	54274784	54317481	-1	homozygous	0.99	2446	2447
1_bsssi_sop	inv	assembly_comparison	7	54373060	54428379	-1	homozygous	0.99	2447	2446
1_bsssi_sop	inv	assembly_comparison	7	54274784	54317481	-1	homozygous	0.99	2451	2452
1_bsssi_sop	inv	assembly_comparison	7	54373060	54428379	-1	homozygous	0.99	2452	2451
1_bsssi_sop	inv	assembly_comparison	7	57684984	57684984	-1	heterozygous	0.69	2463	2464
1_bsssi_sop	inv	assembly_comparison	7	57684984	57684984	-1	heterozygous	0.86	2467	2468
1_bsssi_sop	inv	assembly_comparison	7	62814907	62814907	-1	heterozygous	0.99	2475	2476
1_bsssi_sop	inv	assembly_comparison	7	62853958	62853958	-1	heterozygous	0.99	2476	2475
1_bsssi_sop	inv	assembly_comparison	7	64632296	64632296	-1	homozygous	0.34	2482	2483
1_bsssi_sop	inv	assembly_comparison	7	64988983	64988983	-1	homozygous	0.38	2490	2491
1_bsssi_sop	inv	assembly_comparison	7	72497202	74531472	-1	unknown	0.01	2505	2506
1_bsssi_sop	inv	assembly_comparison	7	72525264	74561009	-1	unknown	0.07	2507	2508
1_bsssi_sop	inv	assembly_comparison	7	72525264	74880240	-1	heterozygous	0.03	2509	2510
1_bsssi_sop	inv	assembly_comparison	7	72557529	74920948	-1	unknown	0.03	2514	2515
1_bsssi_sop	inv	assembly_comparison	7	72661399	74863973	-1	heterozygous	0.04	2516	2517
1_bsssi_sop	inv	assembly_comparison	7	72690863	74920948	-1	unknown	0.08	2518	2519
1_bsssi_sop	inv	assembly_comparison	7	72727001	74967661	-1	heterozygous	0.01	2522	2523
1_bsssi_sop	inv	assembly_comparison	7	142037970	142109117	-1	homozygous	0.75	2624	2625
1_bsssi_sop	inv	assembly_comparison	7	142037970	142109117	-1	homozygous	0.84	2628	2629
1_bsssi_sop	inv	assembly_comparison	7	142274496	142364363	-1	homozygous	0.20	2631	2632
1_bsssi_sop	inv	assembly_comparison	7	142274496	142354265	-1	homozygous	0.14	2633	2634
1_bsssi_sop	inv	assembly_comparison	7	143948183	143948183	-1	heterozygous	0.99	2639	2640
1_bsssi_sop	inv	assembly_comparison	7	143996974	143996974	-1	heterozygous	0.99	2640	2639
1_bsssi_sop	inv	assembly_comparison	7	143996974	143996974	-1	homozygous	0.28	2643	2644
1_bsssi_sop	inv	assembly_comparison	8	2326453	2326453	-1	homozygous	0.10	2753	2754
1_bsssi_sop	inv	assembly_comparison	8	2333592	2338463	-1	homozygous	0.19	2755	2756
1_bsssi_sop	inv	assembly_comparison	8	7126305	7226637	-1	homozygous	0.09	2776	2777
1_bsssi_sop	inv	assembly_comparison	8	7141549	7238150	-1	homozygous	0.00	2778	2779
1_bsssi_sop	inv	assembly_comparison	8	7141549	7255504	-1	homozygous	0.00	2780	2781
1_bsssi_sop	inv	assembly_comparison	8	7443568	7570218	-1	heterozygous	0.00	2795	2796
1_bsssi_sop	inv	assembly_comparison	8	7443568	7575250	-1	heterozygous	0.00	2797	2798
1_bsssi_sop	inv	assembly_comparison	8	7443568	7529028	-1	heterozygous	0.00	2799	2800
1_bsssi_sop	inv	assembly_comparison	8	7443568	7529028	-1	heterozygous	0.00	2802	2803
1_bsssi_sop	inv	assembly_comparison	8	7428265	11960028	-1	heterozygous	0.00	2805	2806
1_bsssi_sop	inv	assembly_comparison	8	7443568	7529028	-1	heterozygous	0.00	2808	2809
1_bsssi_sop	inv	assembly_comparison	8	7443568	7575250	-1	heterozygous	0.00	2810	2811
1_bsssi_sop	inv	assembly_comparison	8	7472357	7575250	-1	homozygous	0.00	2812	2813
1_bsssi_sop	inv	assembly_comparison	8	7472357	12245340	-1	heterozygous	0.00	2814	2815
1_bsssi_sop	inv	assembly_comparison	8	7472357	7577840	-1	homozygous	0.00	2816	2817
1_bsssi_sop	inv	assembly_comparison	8	7631384	7870584	-1	heterozygous	0.00	2828	2829
1_bsssi_sop	inv	assembly_comparison	8	7630766	7631384	-1	unknown	0.00	2834	2835
1_bsssi_sop	inv	assembly_comparison	8	7630766	12150552	-1	heterozygous	0.00	2837	2838
1_bsssi_sop	inv	assembly_comparison	8	7630766	7631384	-1	heterozygous	0.00	2839	2840
1_bsssi_sop	inv	assembly_comparison	8	7631384	12245340	-1	heterozygous	0.00	2844	2845
1_bsssi_sop	inv	assembly_comparison	8	7631384	12150552	-1	heterozygous	0.00	2846	2847
1_bsssi_sop	inv	assembly_comparison	8	7771130	7870584	-1	heterozygous	0.00	2852	2853
1_bsssi_sop	inv	assembly_comparison	8	7835978	7870584	-1	heterozygous	0.00	2856	2857
1_bsssi_sop	inv	assembly_comparison	8	7852587	7870584	-1	heterozygous	0.00	2860	2861
1_bsssi_sop	inv	assembly_comparison	8	7771130	7876258	-1	heterozygous	0.08	2864	2865
1_bsssi_sop	inv	assembly_comparison	8	7945031	12284549	-1	heterozygous	0.00	2866	2867
1_bsssi_sop	inv	assembly_comparison	8	7945031	12284549	-1	heterozygous	0.00	2868	2869
1_bsssi_sop	inv	assembly_comparison	8	7945031	12288737	-1	heterozygous	0.04	2875	2876
1_bsssi_sop	inv	assembly_comparison	8	9801566	12288737	-1	heterozygous	0.00	2878	2879
1_bsssi_sop	inv	assembly_comparison	9	39168247	42345871	-1	heterozygous	0.00	3154	3155
1_bsssi_sop	inv	assembly_comparison	9	39168247	43753006	-1	heterozygous	0.00	3156	3157
1_bsssi_sop	inv	assembly_comparison	9	39168247	43759956	-1	heterozygous	0.03	3158	3159
1_bsssi_sop	inv	assembly_comparison	9	40779901	43707592	-1	heterozygous	0.00	3162	3163
1_bsssi_sop	inv	assembly_comparison	9	41365732	44998091	-1	heterozygous	0.00	3164	3165
1_bsssi_sop	inv	assembly_comparison	9	42048413	42975868	-1	heterozygous	0.03	3175	3176
1_bsssi_sop	inv	assembly_comparison	9	42058862	42975868	-1	heterozygous	0.00	3179	3180
1_bsssi_sop	inv	assembly_comparison	9	41959120	42667337	-1	heterozygous	0.00	3181	3182
1_bsssi_sop	inv	assembly_comparison	9	42526053	44340865	-1	heterozygous	0.00	3185	3186
1_bsssi_sop	inv	assembly_comparison	9	42526053	44340865	-1	heterozygous	0.00	3188	3189
1_bsssi_sop	inv	assembly_comparison	9	43617441	47165815	-1	heterozygous	0.00	3199	3200
1_bsssi_sop	inv	assembly_comparison	9	43939256	47172217	-1	heterozygous	0.02	3201	3202
1_bsssi_sop	inv	assembly_comparison	9	44307052	44307052	-1	unknown	0.99	3207	3208
1_bsssi_sop	inv	assembly_comparison	9	44340865	44340865	-1	unknown	0.99	3208	3207
1_bsssi_sop	inv	assembly_comparison	9	44668402	47165815	-1	heterozygous	0.00	3209	3210
1_bsssi_sop	inv	assembly_comparison	9	46873174	46879492	-1	heterozygous	0.99	3214	3215
1_bsssi_sop	inv	assembly_comparison	9	46894733	46904721	-1	heterozygous	0.99	3215	3214
1_bsssi_sop	inv	assembly_comparison	9	46873174	46879492	-1	heterozygous	0.99	3216	3217
1_bsssi_sop	inv	assembly_comparison	9	46894733	46904721	-1	heterozygous	0.99	3217	3216
1_bsssi_sop	inv	assembly_comparison	9	65736400	69065961	-1	homozygous	0.00	3220	3221
1_bsssi_sop	inv	assembly_comparison	9	69252028	70366839	-1	heterozygous	0.00	3227	3228
1_bsssi_sop	inv	assembly_comparison	9	69252028	70661798	-1	heterozygous	0.16	3229	3230
1_bsssi_sop	inv	assembly_comparison	10	46420270	48119989	-1	homozygous	0.00	3490	3491
1_bsssi_sop	inv	assembly_comparison	10	47166814	47532265	-1	homozygous	0.07	3501	3502
1_bsssi_sop	inv	assembly_comparison	10	47166814	48119989	-1	homozygous	0.00	3503	3504
1_bsssi_sop	inv	assembly_comparison	10	47769436	51466101	-1	homozygous	0.06	3507	3508
1_bsssi_sop	inv	assembly_comparison	10	51696732	51737533	-1	homozygous	0.64	3514	3515
1_bsssi_sop	inv	assembly_comparison	10	51696732	51737533	-1	homozygous	0.46	3516	3517
1_bsssi_sop	inv	assembly_comparison	10	81297403	81297403	-1	heterozygous	0.45	3552	3553
1_bsssi_sop	inv	assembly_comparison	10	81297403	81507475	-1	homozygous	0.79	3555	3556
1_bsssi_sop	inv	assembly_comparison	10	81468539	81985683	-1	homozygous	0.59	3559	3560
1_bsssi_sop	inv	assembly_comparison	10	81985683	81985683	-1	heterozygous	0.32	3561	3562
1_bsssi_sop	inv	assembly_comparison	11	89652035	89652035	-1	homozygous	0.99	3919	3920
1_bsssi_sop	inv	assembly_comparison	11	89659238	89689238	-1	homozygous	0.99	3920	3919
1_bsssi_sop	inv	assembly_comparison	11	89652035	89652035	-1	homozygous	0.99	3931	3932
1_bsssi_sop	inv	assembly_comparison	11	89659238	89693363	-1	homozygous	0.99	3932	3931
1_bsssi_sop	inv	assembly_comparison	12	1626612	1626612	-1	heterozygous	0.99	4034	4035
1_bsssi_sop	inv	assembly_comparison	12	1639110	1639110	-1	heterozygous	0.99	4035	4034
1_bsssi_sop	inv	assembly_comparison	14	19444137	19894298	-1	heterozygous	0.00	4471	4472
1_bsssi_sop	inv	assembly_comparison	14	19855409	20224961	-1	heterozygous	0.10	4474	4475
1_bsssi_sop	inv	assembly_comparison	15	20636719	22272480	-1	heterozygous	0.08	4592	4593
1_bsssi_sop	inv	assembly_comparison	15	20496990	22398844	-1	heterozygous	0.00	4594	4595
1_bsssi_sop	inv	assembly_comparison	15	20636719	21900861	-1	heterozygous	0.39	4601	4602
1_bsssi_sop	inv	assembly_comparison	15	21178822	22647701	-1	heterozygous	0.00	4607	4608
1_bsssi_sop	inv	assembly_comparison	15	21178822	22647701	-1	heterozygous	0.00	4612	4613
1_bsssi_sop	inv	assembly_comparison	15	23450368	26101403	-1	heterozygous	0.00	4626	4627
1_bsssi_sop	inv	assembly_comparison	15	23649412	28583809	-1	heterozygous	0.05	4628	4629
1_bsssi_sop	inv	assembly_comparison	15	23649412	28597295	-1	heterozygous	0.06	4630	4631
1_bsssi_sop	inv	assembly_comparison	15	28717505	28717505	-1	heterozygous	0.12	4654	4655
1_bsssi_sop	inv	assembly_comparison	15	28960243	29108022	-1	heterozygous	0.00	4659	4660
1_bsssi_sop	inv	assembly_comparison	15	28960243	29108022	-1	heterozygous	0.00	4661	4662
1_bsssi_sop	inv	assembly_comparison	15	29104515	30425617	-1	heterozygous	0.25	4663	4664
1_bsssi_sop	inv	assembly_comparison	15	82766853	82933449	-1	homozygous	0.04	4750	4751
1_bsssi_sop	inv	assembly_comparison	15	83014915	83101987	-1	heterozygous	0.04	4757	4758
1_bsssi_sop	inv	assembly_comparison	15	83027917	84630839	-1	heterozygous	0.31	4759	4760
1_bsssi_sop	inv	assembly_comparison	15	83027917	84630839	-1	heterozygous	0.33	4761	4762
1_bsssi_sop	inv	assembly_comparison	15	83163663	85036010	-1	heterozygous	0.52	4765	4766
1_bsssi_sop	inv	assembly_comparison	15	84979047	85036010	-1	heterozygous	0.53	4772	4773
1_bsssi_sop	inv	assembly_comparison	16	1285730	1285730	-1	homozygous	0.99	4829	4830
1_bsssi_sop	inv	assembly_comparison	16	1300714	1300714	-1	homozygous	0.99	4830	4829
1_bsssi_sop	inv	assembly_comparison	16	1285730	1285730	-1	homozygous	0.99	4840	4841
1_bsssi_sop	inv	assembly_comparison	16	1300714	1300714	-1	homozygous	0.99	4841	4840
1_bsssi_sop	inv	assembly_comparison	16	14822574	15171242	-1	heterozygous	0.00	4856	4857
1_bsssi_sop	inv	assembly_comparison	16	14899543	15171242	-1	heterozygous	0.00	4858	4859
1_bsssi_sop	inv	assembly_comparison	16	15008906	15417135	-1	heterozygous	0.05	4860	4861
1_bsssi_sop	inv	assembly_comparison	16	15008906	15417135	-1	heterozygous	0.09	4862	4863
1_bsssi_sop	inv	assembly_comparison	16	16468063	17655688	-1	heterozygous	0.00	4873	4874
1_bsssi_sop	inv	assembly_comparison	16	16468063	18409565	-1	heterozygous	0.33	4875	4876
1_bsssi_sop	inv	assembly_comparison	16	16491414	18409565	-1	heterozygous	0.00	4877	4878
1_bsssi_sop	inv	assembly_comparison	16	16835835	18487050	-1	heterozygous	0.01	4879	4880
1_bsssi_sop	inv	assembly_comparison	16	17655688	18640827	-1	heterozygous	0.12	4883	4884
1_bsssi_sop	inv	assembly_comparison	16	20503895	20505069	-1	heterozygous	0.99	4893	4894
1_bsssi_sop	inv	assembly_comparison	16	20542398	20542398	-1	heterozygous	0.99	4894	4893
1_bsssi_sop	inv	assembly_comparison	16	21506531	22406302	-1	heterozygous	0.01	4896	4897
1_bsssi_sop	inv	assembly_comparison	16	22400383	22455340	-1	heterozygous	0.00	4898	4899
1_bsssi_sop	inv	assembly_comparison	16	22400383	22455340	-1	heterozygous	0.00	4900	4901
1_bsssi_sop	inv	assembly_comparison	16	28464729	28464729	-1	heterozygous	0.00	4913	4914
1_bsssi_sop	inv	assembly_comparison	16	28595822	28656583	-1	homozygous	0.08	4916	4917
1_bsssi_sop	inv	assembly_comparison	16	32351079	32351079	-1	heterozygous	0.14	4929	4930
1_bsssi_sop	inv	assembly_comparison	16	32351079	32351079	-1	heterozygous	0.08	4931	4932