plot_response {netresponse} | R Documentation

## plot_response

### Description

Plot a specific transcriptional response for a given subnetwork. TRUE, colors = TRUE, plot_type = 'twopi', ...)

### Usage

    plot_response(
      x,
      mynet,
      mybreaks,
      mypalette,
      plot_names = TRUE,
      colors = TRUE,
      plot_type = "twopi",
      ...
    )

### Arguments

`x` | A numerical vector, or NULL.
`mynet` | Binary matrix specifying the interactions between nodes.
`mybreaks` | Specify breakpoints for color plot_
`mypalette` | Specify palette for color plot_
`plot_names` | Plot node names (TRUE) or indices (FALSE).
`colors` | Plot colors. Logical.
`plot_type` | Network plot mode. For instance, 'neato' or 'twopi'.
`...` | Further arguments for plot function.

### Value

Used for its side-effects.

### Author(s)

Leo Lahti, Olli-Pekka Huovilainen and Antonio Gusmao. Maintainer: Leo Lahti <leo.lahti@iki.fi>

### References

L. Lahti et al.: Global modeling of transcriptional responses in interaction networks. Submitted.

### Examples

    #tmp <- plot_response(model, mynet,
    #  \tmaintext = paste('Subnetwork', subnet.id))

[Package netresponse version 1.54.0 Index]