PwfCols-class {ngsReports} | R Documentation

## The PwfCols class and associated methods

### Description

Define the PwfCols class and associated methods

### Details

This is an object of with four colours in components named PASS, WARN, FAIL and MAX. Used to indicate these categories as defined on the standard plots from fastqc.

### Slots

`PASS`

  A vector of length 1, defining the colour for PASS in rgb format. Defaults to rgb(0, 0.8, 0)

`WARN`

  A vector of length 1, defining the colour for WARN in rgb format. Defaults to rgb(0.9, 0.9, 0.2)

`FAIL`

  A vector of length 1, defining the colour for FAIL in rgb format. Defaults to rgb(0.8, 0.2, 0.2)

`MAX`

  A vector of length 1, defining the colour for an extreme FAIL or NA in rgb format. Defaults to rgb(1, 1, 1)

[Package ngsReports version 1.10.0 Index]