plot,fcFilterList,ANY-method {openCyto} | R Documentation

## plot a `fcFilterList`

### Description

It is usually called by `plot` method for `fcTree` instead of directly by users.

### Usage

    ## S4 method for signature 'fcFilterList,ANY'
    plot(
      x,
      y,
      samples = NULL,
      posteriors = FALSE,
      xlim = NULL,
      ylim = NULL,
      node = NULL,
      data = NULL,
      breaks = 20,
      lwd = 1,
      ...
    )

### Arguments

`x` | `fcFilterList`
`y` | `character` channel name
`samples` | `character` a vector of sample names to be plotted
`posteriors` | `logical` indicating whether posteriors should be plotted
`xlim, ylim` | scale settings for x,y axises
`node` | `character` population name associated with the `fcFilterList`
`data` | `GatingSet` object
`breaks` | passed to hist
`lwd` | line width
`...` | other arguments passed to base `plot`

### Examples

    ## Not run:
     env1<-new.env(parent=emptyenv())
     #gt is a gatingTemplate, gs is a GatingSet
     gt_gating(gt,gs,env1) #the flowClust gating results are stored in env1
     plot(env1$fct,"nonDebris",post=T) #plot the priors as well as posteriors for the "nonDebris" gate

    ## End(Not run)

[Package openCyto version 2.6.0 Index]