gt_toggle_helpergates {openCyto} | R Documentation

## toggle/delete the hidden flag of the helper gates

### Description

The helper gates are defined as the referred gates in csv template. And all the chidlren of referred gates are also referred gates thus they are considered the helper gates and can usually be hidden to simply the final gating tree.

### Usage

    gt_toggle_helpergates(gt, gs)

    gt_get_helpergates(gt, gs)

    gt_delete_helpergates(gt, gs)

### Arguments

`gt` | gatingTemplate object
`gs` | GatingSet

### Details

Note that delete action is NOT reversible.

### Examples

    ## Not run:
    gt <- gatingTemplate(gtFile)
    #run the gating
    gt_gating(gt, gs)
    #hide the gates that are not of interest
    gt_toggle_helpergates(gt, gs)
    #or simply remove them if you are sure they will not be useful in future
    gt_delete_helpergates(gt, gs)

    ## End(Not run)

[Package openCyto version 2.6.0 Index]