gprofiler_orgs {orthogene} | R Documentation

## Reference organisms

### Description

Organism for which gene references are available via gProfiler API.

Used as a backup if API is not available.

### Usage

    gprofiler_orgs

### Format

`data.frame` `URL <- 'https://biit.cs.ut.ee/gprofiler/api/util/organisms_list' gprofiler_orgs <- jsonlite::fromJSON(URL) gprofiler_orgs <- dplyr::arrange(gprofiler_orgs, scientific_name) usethis::use_data(gprofiler_orgs, overwrite = TRUE, internal=TRUE)`

### Source

gProfiler site

[Package orthogene version 1.0.2 Index]