815c3492aea21c7da870d8e1053b8b4a *CITATION
9b25047dc4877a9fd7a29fdb78a40b86 *DESCRIPTION
fd29a51879cfabd6417bf2289b2f3f0d *INDEX
b61fd7d1a63b4f70c62b42dab1834a13 *Meta/Rd.rds
d0bbc3859212ebb29ae1f4943cd17367 *Meta/data.rds
8503e676975364d771072956cdbca633 *Meta/features.rds
62c592ba714c2d838897e7954d7263c3 *Meta/hsearch.rds
726bf64c344efbbe5543b5317de2401d *Meta/links.rds
ad0c09c10071de5e07f520eef35f9de7 *Meta/nsInfo.rds
19ea1c9bfc7baad86682ed2aa19cfceb *Meta/package.rds
417ed23ccbdbd1eb9f9e961b4369d0da *Meta/vignette.rds
7217e2e87643c9f2970098660c2dfc85 *NAMESPACE
075e75b6c198869354320762b2113772 *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/packFinder
cec891a1a9f84d366370e32ad470b632 *R/packFinder.rdb
17cfaf1326ff3eb7e35486a4578145e9 *R/packFinder.rdx
d195a0d8b0635ad3e02890c37f08d8ec *data/arabidopsisThalianaRefseq.rda
7c10231018ee618e9321552c9774b89c *data/packMatches.rda
e7ad5e58eaa9b4407df95813d659939e *doc/index.html
fe47d4f69bf44ce0607537eae1e8e0df *doc/packFinder.R
d73a662aa4ef6ee5952e08208776ba51 *doc/packFinder.Rmd
d94bf41c3f744de8ec88123b7ac74fd5 *doc/packFinder.html
cd94aa5a1fc1a44212132b4f2ebc440b *extdata/packMatches.blast6out
18bd0b7c6a73f9ac12ed4817a2b7cd63 *extdata/packMatches.csv
37d897eb070862e4f8eba251eace54e1 *extdata/packMatches.fasta
8ef1c9cbbb2ddf3e20a4e3794e28447f *extdata/packMatches.uc
507829666de1f6426b6c1a580637ccf5 *help/AnIndex
fb87e201b8a51be61fa729fe29b50135 *help/aliases.rds
e48e5f3298e13cf8f798061d39e69796 *help/arabidopsisThalianaRefseq.html
4033b286a0ab636519af19c155740fac *help/blastAnalysis.html
eb41174ab9db2f2521d4e7215c1b7fad *help/blastAnnotate.html
9bb0eded131ebe66d1e6282eabe7bd8b *help/collapseSeqs.html
09e2f8674a09f0b53285218ee3bd15a4 *help/filterWildcards.html
a16931e1f7da375e76bd88be9e7e7133 *help/getPackSeqs.html
ca77bfb934397146d45a5872505d1138 *help/getPacksFromCsv.html
9753ed1435e8895573f3d817d3e3768b *help/getPacksFromFasta.html
05a061c005f951f515c250b78948dab0 *help/getPacksFromGRanges.html
98952d82040987c2c7d490b0e52f58f5 *help/getTsds.html
a9f5319e76a9ed45c34dfef847adcf65 *help/identifyPotentialPackElements.html
92bb84c5fa67296c325eac92517066e8 *help/identifyTirMatches.html
9b20ed21a90f3e2d4349c9400f7dc537 *help/makeBlastDb.html
d8b458b89771f16029c2a30e796653f4 *help/packAlign.html
5d0a51f67ad0a72bf6d2ca9dd07ff71c *help/packBlast.html
e74b5d400261c9cdd4e986c88dcb7c00 *help/packClust.html
b4f11d2de3e82f4a53ca20ec088b74cd *help/packFinder.html
a450957118ff72e5a3f161f67c4781c3 *help/packFinder.rdb
e974ab96a8c533cc83c88cfc661d844e *help/packFinder.rdx
8c51e46fee65ee06fc3ffe646de091a7 *help/packMatches.html
099502a8b6e87f8a9da33afc3bdc375f *help/packSearch.html
8a0e04ec03d38a13c5ed0825bcb24607 *help/packsToCsv.html
393423eba1cc5057f375c3cb71eb7aca *help/packsToFasta.html
b7e03270fdcd720bcc435552b78c8f5e *help/packsToGRanges.html
5f2d6286130adc595e3bbf5cf17496c5 *help/paths.rds
61b00e805d6bc7644e93efdc3dfd62e1 *help/readBlast.html
69578134d530f16bcbfede197b514036 *help/readUc.html
82c10905c11d68b5136c317b580a732b *help/tirClust.html
baf11ecbe7316688b1758e53d7215533 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
a3c5e8f0e45bcd542b88fa83edf9676f *html/arabidopsisThalianaRefseq.html
cf098093f0921d0f01527fe20971f07c *html/blastAnalysis.html
ff2325c578b86d2a94607c8a1028aee3 *html/blastAnnotate.html
b8e87026367b60b47c42b36d2c3f8a73 *html/collapseSeqs.html
6591b90798d143f3173fc8ed9bdbc7c4 *html/filterWildcards.html
14abd30f3b73ded7f757fdcf59eac9ba *html/getPackSeqs.html
c3100f8e1fdb470f5163b7109ebdb4ab *html/getPacksFromCsv.html
47b092ec159dec5e4a61796263a37fd4 *html/getPacksFromFasta.html
88e52c426504d10308ed216eba0e9995 *html/getPacksFromGRanges.html
dfae0eee18a403239ae2c6e8bee8fb8f *html/getTsds.html
9ba6b30defeb1e0bc757549852ae38fb *html/identifyPotentialPackElements.html
c9593d084c9b0371d747fd399fe1a735 *html/identifyTirMatches.html
6470114a75fb4be39c64a699e098b5ab *html/makeBlastDb.html
ae8935febc83ebee60ba065ea058c621 *html/packAlign.html
314744caa4af64dd5fa930798db52d7a *html/packBlast.html
ff3c70a82ac31b6b0cc14166e751f037 *html/packClust.html
bb0585f4235694fd0d2cc8c80f34162f *html/packFinder.html
9844296d0169a4c5ad3dd68db96857bf *html/packMatches.html
578b3735c3f8829e0dcc67e233c5f144 *html/packSearch.html
8ae21b9e8abc48d23e6d915a140cb141 *html/packsToCsv.html
28238ce56760f91e8b1dec9ddd0e8d27 *html/packsToFasta.html
8a2f2e273ac316de90a010e422445758 *html/packsToGRanges.html
955f4037e0d723feb40ea382a3769c0d *html/readBlast.html
e1cce2fef55313dcc29c25c5d45249d6 *html/readUc.html
e5030b1676ec729ac607b8bd3705588e *html/tirClust.html
5e79a916b35847557b5df41a26a86982 *packFinder_hex.png
d6a37a19c5ca8dfbf1fcbf8ed222267b *scripts/blast6out.R
cd61f0bbdb8981a59cf23c14421aab34 *scripts/csv.R
494a7ab5751dfdd054c0e3fc79f4a7e4 *scripts/fasta.R
1b89f96f8728abce4ca2cd853b349131 *scripts/uc.R
