aggregatePipelineResults {pipeComp} | R Documentation

## aggregatePipelineResults

### Description

Aggregates the evaluation and running times of 'runPipeline' results. Results should be indicated either as a 'path“ prefix or as a vector of paths to 'evaluation\.rds' files ('resfiles').

### Usage

    aggregatePipelineResults(res, pipDef = NULL)

### Arguments

`res` | A (named) list of results (per dataset), as produced by `readPipelineResults` (or 'mergePipelineResults').
`pipDef` | An optional `PipelineDefinition` containing the aggregation methods. If omitted, that from the results will be used.

### Value

A list with a slot for each step for which there is an aggregation method, or (if no aggregation method available) a list of the 'stepIntermediateReturnObjects' of 'runPipeline'

### Examples

    # we produce mock pipeline results:
    pip <- mockPipeline()
    datasets <- list( ds1=1:3, ds2=c(5,10,15) )
    tmpdir1 <- paste0(tempdir(),'/')
    res <- runPipeline(datasets, pipelineDef=pip, output.prefix=tmpdir1,
                       alternatives=list() )
    # we read the evaluation files:
    res <- readPipelineResults(tmpdir1)
    # we aggregate the results (equivalent to the output of `runPipeline`):
    res <- aggregatePipelineResults(res)

[Package pipeComp version 1.4.0 Index]