dea_evalPlot_curve {pipeComp} | R Documentation

## dea_evalPlot_curve

### Description

dea_evalPlot_curve

### Usage

    dea_evalPlot_curve(
      res,
      scales = "free",
      agg.by = NULL,
      agg.fn = mean,
      xlim = c(NA, NA),
      colourBy = "method",
      shapeBy = NULL,
      pointsize = 4
    )

### Arguments

`res` | Aggregated results of the DEA pipeline
`scales` | Passed to 'facet_grid'
`agg.by` | Aggregate results by these columns (default no aggregation)
`agg.fn` | Function for aggregation (default mean)
`xlim` | Optional vector of x limits
`colourBy` | Name of column by which to colour
`shapeBy` | Name of column determining the shape of the points. If omitted, the shape will indicate whether the nominal FDR is below or equal the real FDR.
`pointsize` | Size of the points

### Value

A ggplot.

### Examples

    data("exampleDEAresults", package="pipeComp")
    dea_evalPlot_curve(exampleDEAresults, agg.by=c("sva.method"))

[Package pipeComp version 1.4.0 Index]