loadAnnotation {psichomics} | R Documentation

## Load alternative splicing annotation from `AnnotationHub`

### Description

Load alternative splicing annotation from `AnnotationHub`

### Usage

    loadAnnotation(annotation, cache = getAnnotationHubOption("CACHE"))

### Arguments

`annotation` | Character: annotation to load
`cache` | Character: path to `AnnotationHub` cache (used to load alternative splicing event annotation)

### Value

List of data frames containing the alternative splicing annotation per event type

### See Also

Other functions for PSI quantification: `filterPSI()`, `getSplicingEventTypes()`, `listSplicingAnnotations()`, `plotRowStats()`, `quantifySplicing()`

### Examples

    human <- listSplicingAnnotations(species="Homo sapiens")[[1]]
    ## Not run:
    annot <- loadAnnotation(human)

    ## End(Not run)

[Package psichomics version 1.20.2 Index]