read_length {qckitfastq} | R Documentation

## Creates a data frame of read lengths and the number of reads with that read length.

### Description

Creates a data frame of read lengths and the number of reads with that read length.

### Usage

    read_length(fseq, output_file = NA)

### Arguments

`fseq` | a seqTools object produced by seqTools::fastqq on the raw FASTQ file
`output_file` | File to save data frame to. Default NA.

### Value

Data frame of read lengths and number of reads with that length.

### Examples

    infile <- system.file("extdata","test.fq.gz",
        package = "qckitfastq")
    fseq <- seqTools::fastqq(infile,k=6)
    read_len <- read_length(fseq)

[Package qckitfastq version 1.10.0 Index]