lengthDist {riboSeqR} | R Documentation

## A function plotting the density of lengths in a riboData object.

### Description

riboData object contain data on multiple lengths of sequenced reads. This function plots the density of those lengths.

### Usage

    lengthDist(riboDat, add = FALSE, legend = NULL, ...)

### Arguments

`riboDat` | riboData object to be plotted
`add` | Should the curve be added to an existing plot, or a new plot drawn?
`legend` | Legend text, if given.
`...` | Additional arguments to be passed to ‘plot’ or ‘legend’.

### Author(s)

Thomas J. Hardcastle

### Examples

    #ribosomal footprint data
    datadir <- system.file("extdata", package = "riboSeqR")
    ribofiles <- paste(datadir,
                       "/chlamy236_plus_deNovo_plusOnly_Index", c(17,3,5,7), sep = "")
    rnafiles <- paste(datadir,
                      "/chlamy236_plus_deNovo_plusOnly_Index", c(10,12,14,16), sep = "")

    riboDat <- readRibodata(ribofiles, rnafiles, replicates = c("WT", "WT",
    "M", "M"))

    lengthDist(riboDat)

[Package riboSeqR version 1.28.0 Index]