StartracOut {scRepertoire} | R Documentation

## The StartracOUt Class

### Description

Object store the result of Startrac.run:

### Slots

`proj`

  character. identification of the object. For example, patient id. default: "AID"

`cluster.data`

  data.frame. Each line for a cluster; contain the cluster level indexes information

`pIndex.migr`

  data.frame. Each line for a cluster; pairwise migration index between the two locations indicated in the column name.

`pIndex.tran`

  data.frame. Each line for a cluster; pairwise transition index betwwen the two major clusters indicated by the row name and column name.

`cluster.sig.data`

  data.frame. Each line for a cluster; contains the p values of cluster indices.

`pIndex.sig.migr`

  data.frame. Each line for a cluster; contains the p values of pairwise migration indices.

`pIndex.sig.tran`

  data.frame. Each line for a cluster; contains the p values of pairwise transition indices.

`objects`

  list. other objects

[Package scRepertoire version 1.4.0 Index]