computeMedianCV_SCoPE2 {scp} | R Documentation

## (Deprecated) Compute the median coefficient of variation (CV) per cell

### Description

This function is deprecated and should no longer be used. To reproduce the SCoPE2 script, you can now use `medianCVperCell` with the following arguments:

### Usage

    computeMedianCV_SCoPE2(object, i, peptideCol, proteinCol, batchCol)

### Arguments

`object` | NULL
`i` | NULL
`peptideCol` | NULL
`proteinCol` | NULL
`batchCol` | NULL

### Details

- `norm = "SCoPE2"`

- `nobs = 6`

Make sure to provide the peptide data from separate assays so that the normalization factors are computed per batch.

[Package scp version 1.4.0 Index]